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Journal Articles

A microRNA Expression-Based Model Predicts Event Free Survival in Pediatric Acute Myeloid Leukemia

Emilia L. Lim, PhD, Diane L. Trinh, MSc, Rhonda E. Ries, MA, Jim Wang, Yussanne Ma, PhD, James Topham, Maya D. Hughes, MD, Erin Pleasance, PhD, Andrew J. Mungall, Richard Moore, PhD, Yongjun Zhao, PhD, E. Anders Kolb, MD, Alan S. Gamis, MD MPH, Daniela S. Gerhard, PhD, Todd A. Alonzo, PhD, Soheil Meshinchi, MD PhD, Marco A. Marra, PhD

Blood (2016) 128 (22): 1210.

https://doi.org/10.1182/blood.V128.22.1210.1210

Published: 2016

Journal Articles

Characterization of Genomic Rearrangements Involving CIITA and SOCS1 U sing Targeted Capture Sequencing of Archival Tissue Specimens

Anja Mottok, Lauren Chong, MSc, Susana Ben-Neriah, Bruce Woolcock, MSc, Yongjun Zhao, PhD, Marco A Marra, PhD, David W. Scott, Randy D. Gascoyne, Andrew J. Mungall, Christian Steidl

Blood (2016) 128 (22): 2925.

https://doi.org/10.1182/blood.V128.22.2925.2925

Published: 2016

Journal Articles

Comprehensive characterization of programmed death ligand structural rearrangements in B-cell non-Hodgkin lymphomas

Lauren C. Chong, David D. W. Twa, Anja Mottok, Susana Ben-Neriah, Bruce W. Woolcock, Yongjun Zhao, Kerry J. Savage, Marco A. Marra, David W. Scott, Randy D. Gascoyne, Ryan D. Morin, Andrew J. Mungall, Christian Steidl

Blood (2016) 128 (9): 1206–1213.

https://doi.org/10.1182/blood-2015-11-683003

Published: 2016

Includes: Supplemental data

Journal Articles

Comprehensive Sequence Analysis of Relapse and Refractory Pediatric Acute Myeloid Leukemia Identifies miRNA and mRNA Transcripts Associated with Treatment Resistance - a Report from the COG/NCI-Target AML Initiative

Emilia L. Lim, Diane L. Trinh, MSc, Rhonda E. Ries, MA, Yussanne Ma, PhD, James Topham, Maya D. Hughes, MD, Erin Pleasance, PhD, Andrew J. Mungall, PhD, Richard Moore, PhD, Yongjun Zhao, PhD, Daniela S. Gerhard, PhD, Vivian Oehler, MD, E. Anders Kolb, MD, Alan S. Gamis, MD MPH, Malcolm A. Smith, MD PhD, Todd A. Alonzo, PhD, Robert J. Arceci, MD PhD, Soheil Meshinchi, MD PhD, Marco A. Marra, PhD

Blood (2015) 126 (23): 687.

https://doi.org/10.1182/blood.V126.23.687.687

Published: 2015

Journal Articles

Analysis of FOXO1 mutations in diffuse large B-cell lymphoma

Diane L. Trinh, David W. Scott, Ryan D. Morin, Maria Mendez-Lago, Jianghong An, Steven J. M. Jones, Andrew J. Mungall, Yongjun Zhao, Jacqueline Schein, Christian Steidl, Joseph M. Connors, Randy D. Gascoyne, Marco A. Marra

Blood (2013) 121 (18): 3666–3674.

https://doi.org/10.1182/blood-2013-01-479865

Published: 2013

Includes: Supplemental data

Journal Articles

Time Course Studies of the Progeny of Barcoded CD34 + Human Cord Blood Cells Generated in Transplanted NOD/SCID-IL2Rγ −/− Mice Unveil the Clonal Dynamics of Short Term, Intermediate Term and Long Term Repopulating Cells

Alice M.S. Cheung, PhD, Long V. Nguyen, Annaick Carles, Paul H. Miller, Philip A Beer, BM, MRCP, MRCPath, Pawan Pandoh, David Knapp, Kiran Dhillon, Kane Tse, Thomas Zeng, Yongjun Zhao, Martin Hirst, Ph.D., Connie J. Eaves, PhD

Blood (2012) 120 (21): 28.

https://doi.org/10.1182/blood.V120.21.28.28

Published: 2012

Journal Articles

Identification and characterization of Hoxa9 binding sites in hematopoietic cells

Yongsheng Huang, Kajal Sitwala, Joel Bronstein, Daniel Sanders, Monisha Dandekar, Cailin Collins, Gordon Robertson, James MacDonald, Timothee Cezard, Misha Bilenky, Nina Thiessen, Yongjun Zhao, Thomas Zeng, Martin Hirst, Alfred Hero, Steven Jones, Jay L. Hess

Blood (2012) 119 (2): 388–398.

https://doi.org/10.1182/blood-2011-03-341081

Published: 2012

Includes: Supplemental data

Journal Articles

BCL2 Is Highly Mutated In Diffuse Large B-Cell Lymphoma

Johanna M Schuetz, Nathalie A Johnson, MD, Ph.D., Ryan D Morin, M.Sc., Martin Hirst, Ph.D., Yongjun Zhao, M.Sc., DVM, Angela Tam, B.Sc., Richard Moore, Ph.D., Thomas Zeng, M.Sc., Marco A Marra, Ph.D., Joseph M. Connors, MD, Angela R Brooks-Wilson, Randy D. Gascoyne, MD

Blood (2010) 116 (21): 4187.

https://doi.org/10.1182/blood.V116.21.4187.4187

Published: 2010

Journal Articles

Mutations In MLL2 and MEF2B Genes In Follicular Lymphoma and Diffuse Large B-Cell Lymphoma

Blood (2010) 116 (21): 473.

https://doi.org/10.1182/blood.V116.21.473.473

Published: 2010

Journal Articles

Recurrent DNA Mutations In Non-Hodgkin Lymphomas Reveal Candidate Therapeutic Targets

Blood (2010) 116 (21): 632.

https://doi.org/10.1182/blood.V116.21.632.632

Published: 2010

Journal Articles

Identification of Genes Frequently Mutated In FL and DLBCL with Transcriptome, Genome and Exome Sequencing

Blood (2010) 116 (21): 804.

https://doi.org/10.1182/blood.V116.21.804.804

Published: 2010

Journal Articles

Next Generation Transcriptomic Resequencing Identifies Novel Genetic Alterations in High-Risk (HR) Childhood Acute Lymphoblastic Leukemia (ALL): A Report From the Children's Oncology Group (COG) HR ALL TARGET Project.

Blood (2009) 114 (22): 704.

https://doi.org/10.1182/blood.V114.22.704.704

Published: 2009

Journal Articles

FAS Mutations in Follicular Lymphoma Are Rare but Associated with Aggressive Clinical Behavior.

Nathalie A. Johnson, MD, Ryan Morin, PhD, Tesa Severson, M.Sc., Andrew J. Mungall, Ph.D., Yongjun Zhao, Jacqueline E. Schein, M.Sc., Merrill Boyle, Bruce Woolcock, PhD, Richard Moore, Ph.D., Robert Holt, Douglas E. Horsman, Joseph M. Connors, Steven Jones, Martin Hirst, Marco A Marra, Randy D. Gascoyne, MD

Blood (2009) 114 (22): 3967.

https://doi.org/10.1182/blood.V114.22.3967.3967

Published: 2009

Journal Articles

Base-Pair Resolution of Somatic and Germline-Derived Genome Rearrangement Breakpoints in Follicular Lymphoma.

Blood (2009) 114 (22): 439.

https://doi.org/10.1182/blood.V114.22.439.439

Published: 2009

Journal Articles

Tyrosine 641 of the EZH2 Oncogene Is Frequently Mutated in Follicular and Diffuse Large B-Cell Lymphomas of Germinal Center Origin.

Blood (2009) 114 (22): 139.

https://doi.org/10.1182/blood.V114.22.139.139

Published: 2009

Journal Articles

Comparative Whole Transcriptome Shotgun Sequencing (WTSS) of Myeloma at Diagnosis and at Drug-Resistant Relapse.

Tony Reiman, MD, Ryan Morin, PhD, Rodrigo Goya, Tina Wong, Yongjun Zhao, Martin Hirst, Linda M. Pilarski, PhD, Andrew Belch, MD, Marco Marra, PhD

Blood (2009) 114 (22): 603.

https://doi.org/10.1182/blood.V114.22.603.603

Published: 2009

Journal Articles

Prospective isolation and molecular characterization of hematopoietic stem cells with durable self-renewal potential

David G. Kent, Michael R. Copley, Claudia Benz, Stefan Wöhrer, Brad J. Dykstra, Elaine Ma, John Cheyne, Yongjun Zhao, Michelle B. Bowie, Yun Zhao, Maura Gasparetto, Allen Delaney, Clayton Smith, Marco Marra, Connie J. Eaves

Blood (2009) 113 (25): 6342–6350.

https://doi.org/10.1182/blood-2008-12-192054

Published: 2009

Includes: Supplemental data

Journal Articles

New Candidate Regulators of Hematopoietic Stem Cells Identified from Transcriptional Comparisons of Highly Purified Populations of Longterm Repopulating Cells with Markedly Different in Vivo Self-Renewal Activities

David G Kent, BSc, Michael R Copley, B.Sc., Claudia Benz, PhD, Brad J Dykstra, PhD, Elaine Ma, BSc, Jay Cheyne, BSc, Yongjun Zhao, MSc, Maura Gasparetto, MD, Allen Delaney, PhD, Clayton Smith, MD, FRCPC, Marco Marra, PhD, Connie J. Eaves, PhD

Blood (2008) 112 (11): 2460.

https://doi.org/10.1182/blood.V112.11.2460.2460

Published: 2008

Journal Articles

Hoxa9 and Meis1 Bind Highly Conserved Elements Near Targets Regulated in Leukemia Cells.

Kajal V. Sitwala, M.D., Ph.D., Yongsheng Huang, Monisha Dandekar, M.D., Gordon Robertson, Ph.D., Timothee Cezard, Misha Bilenky, Ph.D., Nina Thiessen, Yongjun Zhao, Thomas Zeng, Martin Hirst, Ph.D., Alfred Hero, Ph.D., Steven Jones, Ph.D., Jay Hess, M.D., Ph.D.

Blood (2008) 112 (11): 3362.

https://doi.org/10.1182/blood.V112.11.3362.3362

Published: 2008

Journal Articles

Differences in the Transcriptomes of Highly Purified Fetal Liver and Adult Bone Marrow Hematopoietic Stem Cells Revealed by Long Serial Analysis of Gene Expression (LongSAGE)

David Kent, Yun Zhao, Ph.D., Michelle Bowie, Ph.D., Brad Dykstra, Ph.D., Jay Cheyne, B.Sc., Yongjun Zhao, Allen Delaney, Martin Hirst, Marco Marra, Ph.D., Connie J. Eaves, Ph.D.

Blood (2007) 110 (11): 1277.

https://doi.org/10.1182/blood.V110.11.1277.1277

Published: 2007

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A microRNA Expression-Based Model Predicts Event Free Survival in Pediatric Acute Myeloid Leukemia

Characterization of Genomic Rearrangements Involving CIITA and SOCS1 U sing Targeted Capture Sequencing of Archival Tissue Specimens

Comprehensive characterization of programmed death ligand structural rearrangements in B-cell non-Hodgkin lymphomas

Comprehensive Sequence Analysis of Relapse and Refractory Pediatric Acute Myeloid Leukemia Identifies miRNA and mRNA Transcripts Associated with Treatment Resistance - a Report from the COG/NCI-Target AML Initiative

Analysis of FOXO1 mutations in diffuse large B-cell lymphoma

Time Course Studies of the Progeny of Barcoded CD34 + Human Cord Blood Cells Generated in Transplanted NOD/SCID-IL2Rγ −/− Mice Unveil the Clonal Dynamics of Short Term, Intermediate Term and Long Term Repopulating Cells

Identification and characterization of Hoxa9 binding sites in hematopoietic cells

BCL2 Is Highly Mutated In Diffuse Large B-Cell Lymphoma

Mutations In MLL2 and MEF2B Genes In Follicular Lymphoma and Diffuse Large B-Cell Lymphoma

Recurrent DNA Mutations In Non-Hodgkin Lymphomas Reveal Candidate Therapeutic Targets

Identification of Genes Frequently Mutated In FL and DLBCL with Transcriptome, Genome and Exome Sequencing

Next Generation Transcriptomic Resequencing Identifies Novel Genetic Alterations in High-Risk (HR) Childhood Acute Lymphoblastic Leukemia (ALL): A Report From the Children's Oncology Group (COG) HR ALL TARGET Project.

FAS Mutations in Follicular Lymphoma Are Rare but Associated with Aggressive Clinical Behavior.

Base-Pair Resolution of Somatic and Germline-Derived Genome Rearrangement Breakpoints in Follicular Lymphoma.

Tyrosine 641 of the EZH2 Oncogene Is Frequently Mutated in Follicular and Diffuse Large B-Cell Lymphomas of Germinal Center Origin.

Comparative Whole Transcriptome Shotgun Sequencing (WTSS) of Myeloma at Diagnosis and at Drug-Resistant Relapse.

Prospective isolation and molecular characterization of hematopoietic stem cells with durable self-renewal potential

New Candidate Regulators of Hematopoietic Stem Cells Identified from Transcriptional Comparisons of Highly Purified Populations of Longterm Repopulating Cells with Markedly Different in Vivo Self-Renewal Activities

Hoxa9 and Meis1 Bind Highly Conserved Elements Near Targets Regulated in Leukemia Cells.

Differences in the Transcriptomes of Highly Purified Fetal Liver and Adult Bone Marrow Hematopoietic Stem Cells Revealed by Long Serial Analysis of Gene Expression (LongSAGE)

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