Missense mutations identified in compound heterozygotes with nonsense or frameshift mutations encoded in the second allele of PRF1
PFP genotype ID . | Amino acid substitution . | Amino acid . | . | Predicted domain . | Lytic activity, % of WT PFP . | Age at HLH diagnosis, mo . | |
---|---|---|---|---|---|---|---|
. | . | Rodent . | Flounder . | . | . | . | |
H9 | Gly45Glu | Gly | Gly | N-terminal | 0 | 8 | |
I9 | Asp70Tyr | Asp | Asp | ? | 0 | 96 | |
J9 | Cys73Arg | Cys | Cys | ? | 0 | 4 | |
K9 | Phe157Val | Phe | Tyr | ? | 0 | 2 | |
L9 | His222Gln | His | His | α-helix | 0 | 3 | |
M14 | Arg232Cys* | Arg | Ser | α-helix | 0 | 72 | |
N8 | Arg232His*† | Arg | Ser | α-helix | 15-20 | 27, 144 | |
O7 | Asn252Ser‡ | Asp | Glu | ? | 100 | 1, 1 | |
P8 | Glu261Lys | Glu | Ser | ? | 0 | NR | |
Q9 | Asp313Val | Asp | Asp | ? | 15 | NR | |
R9 | Gln481Pro | Gln | Glu | C2 | < 7 | 2 |
PFP genotype ID . | Amino acid substitution . | Amino acid . | . | Predicted domain . | Lytic activity, % of WT PFP . | Age at HLH diagnosis, mo . | |
---|---|---|---|---|---|---|---|
. | . | Rodent . | Flounder . | . | . | . | |
H9 | Gly45Glu | Gly | Gly | N-terminal | 0 | 8 | |
I9 | Asp70Tyr | Asp | Asp | ? | 0 | 96 | |
J9 | Cys73Arg | Cys | Cys | ? | 0 | 4 | |
K9 | Phe157Val | Phe | Tyr | ? | 0 | 2 | |
L9 | His222Gln | His | His | α-helix | 0 | 3 | |
M14 | Arg232Cys* | Arg | Ser | α-helix | 0 | 72 | |
N8 | Arg232His*† | Arg | Ser | α-helix | 15-20 | 27, 144 | |
O7 | Asn252Ser‡ | Asp | Glu | ? | 100 | 1, 1 | |
P8 | Glu261Lys | Glu | Ser | ? | 0 | NR | |
Q9 | Asp313Val | Asp | Asp | ? | 15 | NR | |
R9 | Gln481Pro | Gln | Glu | C2 | < 7 | 2 |
The original reference for each patient PFP genotype is shown in the first column as a superscript. Amino acid conservation is derived from the amino acid sequence alignment of mammalian and flounder perforins, as in PredictProtein28 (EMBL-Heidelberg). PFP indicates perforin; ?, unknown domain; and NR, not reported.
Shown in Figure 6.
Shown in Figure 2.
Shown in Figure 3.