Table 1.

Construction of fusion genes coding for a modified 38C13 idiotype




Annealing
Constructs and primers*
Region encoded by the set of primers
Temp, °C
Time, s
Sig-HA1-VL-LAMP1    
   TTGTCGACGGATCC/ATGGCGGCCCCCG  SalI-BamHI/Sig1-4  50   30  
   GTAATCTGGAACATCGTATGGGTA/TAGATCCTCAAAGAGTGC   Sig23-28-HA11-8   
   CTTAACAACATGTTGATCCC   LAMP1365-371  58   30  
   TTCCGCGGGAATCCCTAGATGGTCTGATAGCCGGC   LAMP1398-403/EcoRI-SacII   
   CCATACGATGTTCCAGATTACGCT/GACATCCAGATGACACAG   HA12-9-VL1-6VL100-106-LAMP1365-371  52   30  
   GGGGATCAACATGTTGTTAAG/TTTTATTTCCAGCTTGGTCCC     
   TTGTCGACGGATCC/ATGGCGGCCCCCG  SalI-BamHI/Sig1-4  58   30  
   GGGGATCAACATGTTGTTAAG/TTTTATTTCCAGCTTGGTCCC   VL100-106-LAMP1365-371   
Sig-VH-HA1-LAMP1    
   TTGTCGACGGATCC/ATGGCGGCCCCCG  SalI-BamHI/Sig1-4  50   30  
   CCACCAGCTTCACCTC/TAGATCCTCAAAGAGTGC   Sig25-29-VH1-6   
   CTTAACAACATGTTGATCCC   LAMP1365-371  58   30  
   TTCCGCGGGAATCCCTAGATGGTCTGATAGCCGG   LAMP1398-403/EcoRI-SacII   
   ATGGAGGTGAAGCTGGTGG   VH1-5  50   30  
   AATGGGGATCAACATGTTGTTAAG/AGCGTAATCTGGAACATC   HA14-9-LAMP1365-372   
   ATGGAGGTGAAGCTGGTGGC   LAMP1365-371  60   60  
   TTCCGCGGGAATCCCTAGATGGTCTGATAGCCGG   HA14-9-LAMP1365-372   
   TTGTCGACGGATCC/ATGGCGGCCCCCG  SalI-BamHI/Sig1-4  58   60  
   TTCCGCGGAATCCCTAGATGGTCTGATAGCCGGC   LAMP1398-403/EcoRI-SacII   
HA1-VL    
   CCATACGATGTTCCAGATTACGCT/GACATCCAGATGACACA   HA12-9-VL1-6  52   30  
   TTCCGCGGGAATTCCTATTTTAT TTCCAGCTTGGTCCC   VL100-106/EcoRI-SacII   
   TTGTCGACGGATCCATGTACCCA TACGATGTTCCAGAT  SalI-BamHI/HA11-7  60   60  
   TTCCGCGGGAATTCCTATTTTAT TTCCAGCTTGGTCCC   HA12-9-VL100-106/EcoRI-SacII   
VH-HA1    
   TTGTCGACGGATCCATGGAGGTG AAGCTGGTGG  SalI-BamHI/VH1-6  58   30  
   ATCTGGAACATCGTATGGGTA/TGAGGAGACGGTGAGAGTG   HA11-7-VH120-126   
   TTGTCGACGGATCCATGGAGGTG AAGCTGGTGG  SalI-BamHI/VH1-6  58   30  
   TTCCGCGGGAATCCCTAAGCGTA ATCTGGAACATC
 
HA14-9/EcoRI-SacII
 

 

 



Annealing
Constructs and primers*
Region encoded by the set of primers
Temp, °C
Time, s
Sig-HA1-VL-LAMP1    
   TTGTCGACGGATCC/ATGGCGGCCCCCG  SalI-BamHI/Sig1-4  50   30  
   GTAATCTGGAACATCGTATGGGTA/TAGATCCTCAAAGAGTGC   Sig23-28-HA11-8   
   CTTAACAACATGTTGATCCC   LAMP1365-371  58   30  
   TTCCGCGGGAATCCCTAGATGGTCTGATAGCCGGC   LAMP1398-403/EcoRI-SacII   
   CCATACGATGTTCCAGATTACGCT/GACATCCAGATGACACAG   HA12-9-VL1-6VL100-106-LAMP1365-371  52   30  
   GGGGATCAACATGTTGTTAAG/TTTTATTTCCAGCTTGGTCCC     
   TTGTCGACGGATCC/ATGGCGGCCCCCG  SalI-BamHI/Sig1-4  58   30  
   GGGGATCAACATGTTGTTAAG/TTTTATTTCCAGCTTGGTCCC   VL100-106-LAMP1365-371   
Sig-VH-HA1-LAMP1    
   TTGTCGACGGATCC/ATGGCGGCCCCCG  SalI-BamHI/Sig1-4  50   30  
   CCACCAGCTTCACCTC/TAGATCCTCAAAGAGTGC   Sig25-29-VH1-6   
   CTTAACAACATGTTGATCCC   LAMP1365-371  58   30  
   TTCCGCGGGAATCCCTAGATGGTCTGATAGCCGG   LAMP1398-403/EcoRI-SacII   
   ATGGAGGTGAAGCTGGTGG   VH1-5  50   30  
   AATGGGGATCAACATGTTGTTAAG/AGCGTAATCTGGAACATC   HA14-9-LAMP1365-372   
   ATGGAGGTGAAGCTGGTGGC   LAMP1365-371  60   60  
   TTCCGCGGGAATCCCTAGATGGTCTGATAGCCGG   HA14-9-LAMP1365-372   
   TTGTCGACGGATCC/ATGGCGGCCCCCG  SalI-BamHI/Sig1-4  58   60  
   TTCCGCGGAATCCCTAGATGGTCTGATAGCCGGC   LAMP1398-403/EcoRI-SacII   
HA1-VL    
   CCATACGATGTTCCAGATTACGCT/GACATCCAGATGACACA   HA12-9-VL1-6  52   30  
   TTCCGCGGGAATTCCTATTTTAT TTCCAGCTTGGTCCC   VL100-106/EcoRI-SacII   
   TTGTCGACGGATCCATGTACCCA TACGATGTTCCAGAT  SalI-BamHI/HA11-7  60   60  
   TTCCGCGGGAATTCCTATTTTAT TTCCAGCTTGGTCCC   HA12-9-VL100-106/EcoRI-SacII   
VH-HA1    
   TTGTCGACGGATCCATGGAGGTG AAGCTGGTGG  SalI-BamHI/VH1-6  58   30  
   ATCTGGAACATCGTATGGGTA/TGAGGAGACGGTGAGAGTG   HA11-7-VH120-126   
   TTGTCGACGGATCCATGGAGGTG AAGCTGGTGG  SalI-BamHI/VH1-6  58   30  
   TTCCGCGGGAATCCCTAAGCGTA ATCTGGAACATC
 
HA14-9/EcoRI-SacII
 

 

 

VH and VL from 38C13 were fused with the leader sequence of LAMP1 (Sig), the marker HA1, and the lysosomal targeting signal of LAMP1 (LAMP1) by strand overlapping PCR. Constructs without LAMP1 signals were prepared and used as controls. Extension was done at 72°C for 60 seconds for each construct.

Temp indicates temperature; sig, 5′ sorting signal of the mouse LAMP1; HA1, tag-peptide derived from hemagglutinin of influenza virus; VH, variable region of the heavy chain of the Id expressed by the 38C13 lymphoma; VL, variable region of the light chain of the Id expressed by the 38C13 lymphoma; LAMP1, 3′ transmembrane and cytoplasmic tail of the mouse LAMP1.

*

Sense and antisense primers are shown. Restriction enzyme sites are underlined

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