Table 3.

Genes associated with hematopoietic cells


Array location

BM intensity

ESC intensity

ESC/BM ratio

Gene-protein description/name

GenBank no.
D05ef5   2   0   ↓   fms-related tyrosine kinase 3, flt3/flk2  U02687  
F11cd2   2   0   ↓   Tyrosine kinase with immunoglobulin and EGF homology domains, Tie-1 NM_005424 
J21ab6   2   0   ↓   Interleukin-12 receptor, β2  NM_001559 
O11ef7   2   0   ↓   Interleukin-7 receptor   M29696  
L20ab4   3   0   ↓   GATA binding protein 2, GATA-2 NM_002050 
M01ab5   6   0   ↓   v-ets erythroblastosis virus E26 oncogene-like (avian), Erg-2 NM_004449 
C01ef6   2   0   ↓   Ras-related C3 botulinum toxin substrate 1, rac  M29870  
H06ef5   3   0   ↓   Growth factor receptor-bound protein 2, Grb2  L29511  
J09ef1   2   0   ↓   Phosphoinositide-3-kinase, class 2, β polypeptide, Pl3K  Y11312  
E06ef6   2   0   ↓   B-cell CLL/lymphoma 2, BCL2  M14745  
K24ef1   47   0   ↓   BCL2-antagonist of cell death   U66879  
B09gh1   4   0   ↓   Bcl-2-associated transcription factor  NM_014739 
N04ab6   2   0   ↓   Laminin, α 4  NM_002290 
D15ef7   2   0   ↓   Inhibin, βA (activin A, activin AB alpha polypeptide)   J03634  
O24ab7   2   0   ↓   Inhibin, βC  NM_005538 
G22gh6   2   0   ↓   Colony-stimulating factor 2 (granulocyte-macrophage), GM-CSF NM_000758 
M24ef7   2   0   ↓   Macrophage stimulating 1 (hepatocyte growth factor-like)   M74178  
H02ab7   3   0   ↓   Interferon, α14  NM_002172 
H03ef7   4   0   ↓   Interleukin-13   L06801  
H13ef7   5   0   ↓   Interleukin-15   U14407  
K09ef4   2   0   ↓   Interleukin-26  NM_018402 
O22ef7   2   0   ↓   Interleukin-8   Y00787  
C15cd3   2   0   ↓   Small inducible cytokine A2 (monocyte chemotactic protein 1), CCL2 NM_002982 
E23ef5   6   0   ↓   Small inducible cytokine A7 (monocyte chemotactic protein 3), MCP3  X72308  
F14cd1   2   0   ↓   Small inducible cytokine subfamily B (Cys-Xaa-Cys), member 6, CXCL6 NM_002993 
K22ef7   13   0   ↓   Small inducible cytokine A5 (RANTES)   M21121  
M08ef7   16   0   ↓   Small inducible cytokine A1, I-309   M57502  
N08cd6   2   0   ↓   Small inducible cytokine subfamily A (Cys-Cys), member 27, CCL27 NM_006664 
N01ab7   7   0   ↓   Myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila), MLL NM_005933 
G21ef7   77   8   0.104   Laminin receptor 1 (67 kDa, ribosomal protein SA)   U43901  
G14gh6   6   2   0.333   Interferon, α2  NM_000605 
N05ef4   24   10   0.417   Chemokine-like factor 2  NM_016326 
G13ab2   4   2   0.5   Activin A receptor, type IIB  NM_001106 
J01ab7   4   2   0.5   MAD, mothers against decapentaplegic homolog 5 (Drosophila), SMAD5 NM_005903 
M13cd2   3   2   0.667   T-cell acute lymphocytic leukemia 1, SCL NM_003189 
G14ab2   3   2   0.667   Angiopoietin-1  NM_001146 
G16ef5   3   2   0.667   v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog, c-kit  X06182  
C23ab3   50   38   0.76   β2-microglobulin  NM_004048 
I23ef4   43   34   0.791   Chemokine-like factor 1  NM_016951 
K23cd4   9   8   0.889   Mitogen-activated protein kinase-activated protein kinase 3, MAPAPK3 NM_004635 
A10ab3   2   2   1   Bone morphogenetic protein 7 (osteogenic protein 1), BMP-7 NM_001719 
F02cd1   2   2   1   Small inducible cytokine subfamily A (Cys-Cys), member 11 (eotaxin), CCL 11 NM_002986 
L23ab2   2   2   1   Angiopoietin-like 1  NM_004673 
N12ab3   2   2   1   Bone morphogenetic protein 4, BMP-4 NM_001202 
A05gh1   2   2   1   Stromal cell—derived factor 2-like 1, SCDF2L1 NM_022044 
G11ab2   3   4   1.333   Activin A receptor, type II  NM_001616 
M01cd1   8   12   1.5   Nuclear factor (erythroid-derived 2), 45 kDa, Nf-E2 NM_006163 
C18ab6   0   16   ↑   Glycophorin B (includes Ss blood group)  NM_002100 
L03ab3   0   4   ↑   CD14 antigen  NM_000591 
E21ef7   0   8   ↑   Integrin, β6   M35198  
E21gh1   0   4   ↑   Signal transducer and activator of transcription 5A, Stat5a NM_003152 
G21cd2   0   4   ↑   Signal transducer and activator of transcription 4, Stat4 NM_003151 
B13ef5   0   6   ↑   Mitogen-activated protein kinase 3, MAPK3  X60188  
B19ef5   0   8   ↑   Mitogen-activated protein kinase 4, MAPK4  X59727  
L09ab6   0   4   ↑   Inositol polyphosphate phosphatase-like 1, SHIP-2 NM_001567 
L16ef5   0   4   ↑   Mitogen-activated protein kinase 8, MAPK8  L26318  
N04ef5   0   4   ↑   Janus kinase 2 (a protein tyrosine kinase), JAK2  AF005216  
A08ef7   0   12   ↑   Interleukin-1 receptor, type II   X59770  
K08ab5   0   6   ↑   Chemokine (C motif) XC receptor 1  NM_005283 
C03cd8   0   4   ↑   Interleukin-1, δ  NM_012275 
L04ef8   0   4   ↑   Fibroblast growth factor 20, FGF-20 NM_019851 
N08ab3   0   4   ↑   Bone morphogenetic protein 1, BMP-1 NM_001199 
P20ab5   0   4   ↑   Epidermal growth factor (β-urogastrone), EGF NM_001963 
P24cd2   2   4   2   Platelet factor 4  NM_002619 
G09ab2   4   8   2   Activin A receptor, type IB  NM_004302 
F14cd2   2   6   3   Stromal cell-derived factor 2, SCDF2 NM_006923 
I14ab6   2   6   3   Integrin, β2 (antigen CD18 [p95])  NM_000211 
M03cd1   1   4   4   Nuclear factor (erythroid-derived 2)-like 2, Nrf-2 NM_006164 
L18ef4   1   4   4   Putative leukocyte platelet-activating factor receptor   M76676  
O16ef7   1   4   4   Platelet-derived growth factor alpha polypeptide, PDGF-a  X06374  
G24cd7   1   4   4   Mitogen-activated protein kinase kinase kinase kinase 1, MAP4K1 NM_007181 
B21ef5   1   6   6   Mitogen-activated protein kinase 7, MAPK7  U25278  
J05ab7   1   10   10   MAD, mothers against decapentapiegic homolog 9 (Drosophila), SMAD9 NM_005905 
M02ab6
 
11
 
116
 
10.55
 
Myeloperoxidase, MPO
 
NM_000250
 

Array location

BM intensity

ESC intensity

ESC/BM ratio

Gene-protein description/name

GenBank no.
D05ef5   2   0   ↓   fms-related tyrosine kinase 3, flt3/flk2  U02687  
F11cd2   2   0   ↓   Tyrosine kinase with immunoglobulin and EGF homology domains, Tie-1 NM_005424 
J21ab6   2   0   ↓   Interleukin-12 receptor, β2  NM_001559 
O11ef7   2   0   ↓   Interleukin-7 receptor   M29696  
L20ab4   3   0   ↓   GATA binding protein 2, GATA-2 NM_002050 
M01ab5   6   0   ↓   v-ets erythroblastosis virus E26 oncogene-like (avian), Erg-2 NM_004449 
C01ef6   2   0   ↓   Ras-related C3 botulinum toxin substrate 1, rac  M29870  
H06ef5   3   0   ↓   Growth factor receptor-bound protein 2, Grb2  L29511  
J09ef1   2   0   ↓   Phosphoinositide-3-kinase, class 2, β polypeptide, Pl3K  Y11312  
E06ef6   2   0   ↓   B-cell CLL/lymphoma 2, BCL2  M14745  
K24ef1   47   0   ↓   BCL2-antagonist of cell death   U66879  
B09gh1   4   0   ↓   Bcl-2-associated transcription factor  NM_014739 
N04ab6   2   0   ↓   Laminin, α 4  NM_002290 
D15ef7   2   0   ↓   Inhibin, βA (activin A, activin AB alpha polypeptide)   J03634  
O24ab7   2   0   ↓   Inhibin, βC  NM_005538 
G22gh6   2   0   ↓   Colony-stimulating factor 2 (granulocyte-macrophage), GM-CSF NM_000758 
M24ef7   2   0   ↓   Macrophage stimulating 1 (hepatocyte growth factor-like)   M74178  
H02ab7   3   0   ↓   Interferon, α14  NM_002172 
H03ef7   4   0   ↓   Interleukin-13   L06801  
H13ef7   5   0   ↓   Interleukin-15   U14407  
K09ef4   2   0   ↓   Interleukin-26  NM_018402 
O22ef7   2   0   ↓   Interleukin-8   Y00787  
C15cd3   2   0   ↓   Small inducible cytokine A2 (monocyte chemotactic protein 1), CCL2 NM_002982 
E23ef5   6   0   ↓   Small inducible cytokine A7 (monocyte chemotactic protein 3), MCP3  X72308  
F14cd1   2   0   ↓   Small inducible cytokine subfamily B (Cys-Xaa-Cys), member 6, CXCL6 NM_002993 
K22ef7   13   0   ↓   Small inducible cytokine A5 (RANTES)   M21121  
M08ef7   16   0   ↓   Small inducible cytokine A1, I-309   M57502  
N08cd6   2   0   ↓   Small inducible cytokine subfamily A (Cys-Cys), member 27, CCL27 NM_006664 
N01ab7   7   0   ↓   Myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila), MLL NM_005933 
G21ef7   77   8   0.104   Laminin receptor 1 (67 kDa, ribosomal protein SA)   U43901  
G14gh6   6   2   0.333   Interferon, α2  NM_000605 
N05ef4   24   10   0.417   Chemokine-like factor 2  NM_016326 
G13ab2   4   2   0.5   Activin A receptor, type IIB  NM_001106 
J01ab7   4   2   0.5   MAD, mothers against decapentaplegic homolog 5 (Drosophila), SMAD5 NM_005903 
M13cd2   3   2   0.667   T-cell acute lymphocytic leukemia 1, SCL NM_003189 
G14ab2   3   2   0.667   Angiopoietin-1  NM_001146 
G16ef5   3   2   0.667   v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog, c-kit  X06182  
C23ab3   50   38   0.76   β2-microglobulin  NM_004048 
I23ef4   43   34   0.791   Chemokine-like factor 1  NM_016951 
K23cd4   9   8   0.889   Mitogen-activated protein kinase-activated protein kinase 3, MAPAPK3 NM_004635 
A10ab3   2   2   1   Bone morphogenetic protein 7 (osteogenic protein 1), BMP-7 NM_001719 
F02cd1   2   2   1   Small inducible cytokine subfamily A (Cys-Cys), member 11 (eotaxin), CCL 11 NM_002986 
L23ab2   2   2   1   Angiopoietin-like 1  NM_004673 
N12ab3   2   2   1   Bone morphogenetic protein 4, BMP-4 NM_001202 
A05gh1   2   2   1   Stromal cell—derived factor 2-like 1, SCDF2L1 NM_022044 
G11ab2   3   4   1.333   Activin A receptor, type II  NM_001616 
M01cd1   8   12   1.5   Nuclear factor (erythroid-derived 2), 45 kDa, Nf-E2 NM_006163 
C18ab6   0   16   ↑   Glycophorin B (includes Ss blood group)  NM_002100 
L03ab3   0   4   ↑   CD14 antigen  NM_000591 
E21ef7   0   8   ↑   Integrin, β6   M35198  
E21gh1   0   4   ↑   Signal transducer and activator of transcription 5A, Stat5a NM_003152 
G21cd2   0   4   ↑   Signal transducer and activator of transcription 4, Stat4 NM_003151 
B13ef5   0   6   ↑   Mitogen-activated protein kinase 3, MAPK3  X60188  
B19ef5   0   8   ↑   Mitogen-activated protein kinase 4, MAPK4  X59727  
L09ab6   0   4   ↑   Inositol polyphosphate phosphatase-like 1, SHIP-2 NM_001567 
L16ef5   0   4   ↑   Mitogen-activated protein kinase 8, MAPK8  L26318  
N04ef5   0   4   ↑   Janus kinase 2 (a protein tyrosine kinase), JAK2  AF005216  
A08ef7   0   12   ↑   Interleukin-1 receptor, type II   X59770  
K08ab5   0   6   ↑   Chemokine (C motif) XC receptor 1  NM_005283 
C03cd8   0   4   ↑   Interleukin-1, δ  NM_012275 
L04ef8   0   4   ↑   Fibroblast growth factor 20, FGF-20 NM_019851 
N08ab3   0   4   ↑   Bone morphogenetic protein 1, BMP-1 NM_001199 
P20ab5   0   4   ↑   Epidermal growth factor (β-urogastrone), EGF NM_001963 
P24cd2   2   4   2   Platelet factor 4  NM_002619 
G09ab2   4   8   2   Activin A receptor, type IB  NM_004302 
F14cd2   2   6   3   Stromal cell-derived factor 2, SCDF2 NM_006923 
I14ab6   2   6   3   Integrin, β2 (antigen CD18 [p95])  NM_000211 
M03cd1   1   4   4   Nuclear factor (erythroid-derived 2)-like 2, Nrf-2 NM_006164 
L18ef4   1   4   4   Putative leukocyte platelet-activating factor receptor   M76676  
O16ef7   1   4   4   Platelet-derived growth factor alpha polypeptide, PDGF-a  X06374  
G24cd7   1   4   4   Mitogen-activated protein kinase kinase kinase kinase 1, MAP4K1 NM_007181 
B21ef5   1   6   6   Mitogen-activated protein kinase 7, MAPK7  U25278  
J05ab7   1   10   10   MAD, mothers against decapentapiegic homolog 9 (Drosophila), SMAD9 NM_005905 
M02ab6
 
11
 
116
 
10.55
 
Myeloperoxidase, MPO
 
NM_000250
 

↓ indicates genes with expression levels undetectable in cells from ESCs; and ↑, genes with expression levels undetectable in cells from BM.

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