Table 1.

Allele frequencies of 6 dimorphic SNPs located within the VHL gene and flanking regions in healthy individuals and subjects bearing the 598C>T base change


Polymorphism

Allele

Normal N = 4

Heterozygotes N = 10

Homozygotes N = 16
rs776517  A   1.0   0.3   0.0  
    3 kb 5′ to VHL  G   0.0   0.7   1.0  
    (10, 109, 403 bp)      
rs265318  A   1.0   0.4   0.0  
    3 kb 5′ to VHL  C   0.0   0.6   1.0  
    (10, 109, 505 bp)      
rs374645  C   1.0   0.5   0.0  
    Intron 1 VHL  T   0.0   0.5   1.0  
    (10, 116, 017)      
rs2600005   A   0.0   0.6   1.0  
    Intron 2 VHL  G   1.0   0.4   0.0  
    (10, 119, 507)      
rs166538  C   0.5   0.9   1.0  
    3 kb 3′ to VHL  T   0.5   0.1   0.0  
    (10, 127, 692 bp)      
rs458952  A   0.0   0.7   1.0  
    8 kb 3′ to VHL  G   1.0   0.3   0.0  
    (10, 132, 640 bp)
 

 

 

 

 

Polymorphism

Allele

Normal N = 4

Heterozygotes N = 10

Homozygotes N = 16
rs776517  A   1.0   0.3   0.0  
    3 kb 5′ to VHL  G   0.0   0.7   1.0  
    (10, 109, 403 bp)      
rs265318  A   1.0   0.4   0.0  
    3 kb 5′ to VHL  C   0.0   0.6   1.0  
    (10, 109, 505 bp)      
rs374645  C   1.0   0.5   0.0  
    Intron 1 VHL  T   0.0   0.5   1.0  
    (10, 116, 017)      
rs2600005   A   0.0   0.6   1.0  
    Intron 2 VHL  G   1.0   0.4   0.0  
    (10, 119, 507)      
rs166538  C   0.5   0.9   1.0  
    3 kb 3′ to VHL  T   0.5   0.1   0.0  
    (10, 127, 692 bp)      
rs458952  A   0.0   0.7   1.0  
    8 kb 3′ to VHL  G   1.0   0.3   0.0  
    (10, 132, 640 bp)
 

 

 

 

 

rs number indicates reference number in SNPs database from NCBI; bp, location on chromosome 3 reference contig NT-005927 (NCBI); and N, number of alleles

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