Transcripts profile in LPS-stimulated human peripheral blood monocytes
| Abundance (%) . | Tag sequence . | GenBank match (accession number) . |
|---|---|---|
| 3.34 | GCACCAAAGC | MIP1α (D00044) |
| 1.65 | CCCTGGGTTC | Ferritin L chain (M11147) |
| 1.49 | TTGGGGTTTC | Ferritin H chain (M97164) |
| 0.89 | TGTTTTCATA | EST (AA777287) |
| 0.89 | TGGAAGCACT | IL-8 (Y00787) |
| 0.68 | CAAGCATCCC | No reliable matches |
| 0.60 | GATAACACAT | MIP1β (J04130) |
| 0.57 | GTTCACATTA | CD74, HLA-DR invariant chain p33 (X00497) |
| 0.54 | CCCATCGTCC | No reliable matches |
| 0.52 | CCTGTAATCC | Multiple matches |
| 0.51 | TTGGTCCTCT | Ribosomal protein L41 (AF026844) |
| 0.51 | CACCTAATTG | No reliable matches |
| 0.50 | TGTGTTGAGA | Elongation factor 1 α subunit (M27364) |
| 0.49 | CAATTTGTGT | IL-1β (K02770) |
| 0.49 | TGGCCCCAGG | Apolipoprotein C-1 (NM001645) |
| 0.47 | GTTGTGGTTA | β-2 microglobulin (AB021288) |
| 0.46 | TAGCCCCCTG | TNF (M10988) |
| 0.42 | CTAAGACTTC | No reliable matches |
| 0.42 | CGACCCCACG | Apolipoprotein E (M12529) |
| 0.42 | GTGAAACCCC | Multiple matches |
| 0.42 | AGCCCTACAA | No reliable matches |
| 0.39 | CCCGTCCGGA | Ribosomal protein L13 (AA010823) |
| 0.37 | GGGCATCTCT | HLA-DR α chain (V00523) |
| 0.36 | TAGGTTGTCT | Translationally controlled tumor protein (X16064) |
| 0.36 | GTGCACTGAG | Multiple matches |
| 0.36 | GGCACCTCAG | IL-6 (M14584) |
| 0.34 | CTGACCTGTG | MHC class I (M28205) |
| 0.34 | TTGGTGAAGG | Thymosin β-4 (M17733) |
| 0.33 | TTCATACACC | No reliable matches |
| 0.32 | CCACTGCACT | Multiple matches |
| 0.31 | TGGGTGAGCC | Cathepsin B (L16510) |
| 0.31 | ACCCTTGGCC | No reliable matches |
| 0.30 | TGCCTGCACC | Cystatin C (X05607) |
| 0.29 | CCCTTCTGTA | PAI-2 (Y00630) |
| 0.28 | TAACAGCCAG | MAD-3 (M69043) |
| 0.27 | TGCACGTTTT | Ribosomal protein L32 (X03342) |
| 0.27 | AGGCTACGGA | Multiple matches |
| 0.27 | AGGGCTTCCA | Wilm's tumor–related protein (QM) (M64241) |
| 0.27 | GTGCGCTGAG | HLA class IC (X58536) |
| 0.26 | GGATTTGGCC | Multiple matches |
| 0.26 | ACTTTTTCAA | Multiple matches |
| 0.26 | CACAAACGGT | Ribosomal protein S27 (L19739) |
| 0.26 | GGGCTGGGGT | Multiple matches |
| 0.25 | AGCACCTCCA | Elongation factor 2 (Z11692) |
| 0.23 | CTCATAAGGA | No reliable matches |
| 0.23 | CCGTCCAAGG | Ribosomal protein S16 (M60854) |
| 0.23 | CCAGAACAGA | Multiple matches |
| 0.23 | AAGACAGTGG | Ribosomal protein L37a (L06499) |
| 0.23 | TCCAAATCGA | Vimentin (M25246) |
| 0.23 | GGGGAAATCG | Thymosin β10 (M92381) |
| Abundance (%) . | Tag sequence . | GenBank match (accession number) . |
|---|---|---|
| 3.34 | GCACCAAAGC | MIP1α (D00044) |
| 1.65 | CCCTGGGTTC | Ferritin L chain (M11147) |
| 1.49 | TTGGGGTTTC | Ferritin H chain (M97164) |
| 0.89 | TGTTTTCATA | EST (AA777287) |
| 0.89 | TGGAAGCACT | IL-8 (Y00787) |
| 0.68 | CAAGCATCCC | No reliable matches |
| 0.60 | GATAACACAT | MIP1β (J04130) |
| 0.57 | GTTCACATTA | CD74, HLA-DR invariant chain p33 (X00497) |
| 0.54 | CCCATCGTCC | No reliable matches |
| 0.52 | CCTGTAATCC | Multiple matches |
| 0.51 | TTGGTCCTCT | Ribosomal protein L41 (AF026844) |
| 0.51 | CACCTAATTG | No reliable matches |
| 0.50 | TGTGTTGAGA | Elongation factor 1 α subunit (M27364) |
| 0.49 | CAATTTGTGT | IL-1β (K02770) |
| 0.49 | TGGCCCCAGG | Apolipoprotein C-1 (NM001645) |
| 0.47 | GTTGTGGTTA | β-2 microglobulin (AB021288) |
| 0.46 | TAGCCCCCTG | TNF (M10988) |
| 0.42 | CTAAGACTTC | No reliable matches |
| 0.42 | CGACCCCACG | Apolipoprotein E (M12529) |
| 0.42 | GTGAAACCCC | Multiple matches |
| 0.42 | AGCCCTACAA | No reliable matches |
| 0.39 | CCCGTCCGGA | Ribosomal protein L13 (AA010823) |
| 0.37 | GGGCATCTCT | HLA-DR α chain (V00523) |
| 0.36 | TAGGTTGTCT | Translationally controlled tumor protein (X16064) |
| 0.36 | GTGCACTGAG | Multiple matches |
| 0.36 | GGCACCTCAG | IL-6 (M14584) |
| 0.34 | CTGACCTGTG | MHC class I (M28205) |
| 0.34 | TTGGTGAAGG | Thymosin β-4 (M17733) |
| 0.33 | TTCATACACC | No reliable matches |
| 0.32 | CCACTGCACT | Multiple matches |
| 0.31 | TGGGTGAGCC | Cathepsin B (L16510) |
| 0.31 | ACCCTTGGCC | No reliable matches |
| 0.30 | TGCCTGCACC | Cystatin C (X05607) |
| 0.29 | CCCTTCTGTA | PAI-2 (Y00630) |
| 0.28 | TAACAGCCAG | MAD-3 (M69043) |
| 0.27 | TGCACGTTTT | Ribosomal protein L32 (X03342) |
| 0.27 | AGGCTACGGA | Multiple matches |
| 0.27 | AGGGCTTCCA | Wilm's tumor–related protein (QM) (M64241) |
| 0.27 | GTGCGCTGAG | HLA class IC (X58536) |
| 0.26 | GGATTTGGCC | Multiple matches |
| 0.26 | ACTTTTTCAA | Multiple matches |
| 0.26 | CACAAACGGT | Ribosomal protein S27 (L19739) |
| 0.26 | GGGCTGGGGT | Multiple matches |
| 0.25 | AGCACCTCCA | Elongation factor 2 (Z11692) |
| 0.23 | CTCATAAGGA | No reliable matches |
| 0.23 | CCGTCCAAGG | Ribosomal protein S16 (M60854) |
| 0.23 | CCAGAACAGA | Multiple matches |
| 0.23 | AAGACAGTGG | Ribosomal protein L37a (L06499) |
| 0.23 | TCCAAATCGA | Vimentin (M25246) |
| 0.23 | GGGGAAATCG | Thymosin β10 (M92381) |
Top 50 transcripts expressed in LPS-stimulated monocytes are listed.
The tag sequence represents the 10-bp SAGE tag. Probable GenBank matches are listed.
More information on this table is available at our web site (http://www.prevent.m.u-tokyo.ac.jp/SAGE.html).