Incidence of somatically mutated VHtranscripts in lymphocyte cocultures is dependent primarily on the B-cell donor
Experiment . | Source of B cells . | Source of T cells . | Number of transcripts . | Mutated transcripts3-150 (%) . | Nucleotide substitutes3-151 (%) . | |
---|---|---|---|---|---|---|
VH3 . | V3-23 . | |||||
Exp 1 | BMT1 | BMT1 | nd3 | 161 | 12 | |
BMT1 | HS1 | nd | 100 | 8 | ||
HS1 | BMT1 | nd | 138 | 13 | ||
HS1 | HS1 | nd | 155 | 57 | ||
Exp 2 | BMT2 | HS1 | 344 | 151 | 8 | |
Exp 3 | BMT3 | BMT3 | nd | 53 | 15 | |
BMT3 | HS3 | 374 | 99 | 1 | ||
BMT4 | HS3 | >354 | 54 | 86 | ||
HS3 | BMT3 | 712 | 37 | 86 | ||
HS3 | HS3 | >375 | 11 | 65 | ||
BMT3 | — | 726 | 206 | 1 | ||
BMT4 | — | 482 | 59 | 1 | ||
HS3 | — | 381 | 20 | 10 | ||
Exp 4 | BMT6 | BMT6 | 461 | 74 | 1 | |
BMT5 | BMT5 | 922 | 254 | 13 | 0.2 | |
BMT6 | HS4 | 412 | 109 | 10 | ||
BMT5 | HS4 | >742 | 98 | 1 | ||
HS4 | BMT5 | 620 | 273 | 64 | 3.1 | |
HS4 | HS4 | 491 | 74 | 60 | ||
BMT6 | — | 570 | 155 | 11 | ||
BMT5 | — | 789 | 163 | 12 | ||
HS4 | — | 86 | 12 | 0 | ||
Exp 5 | BMT7 | BMT7 | 647 | 152 | 7 | |
BMT7 | HS5 | 751 | 212 | 6 | ||
HS5 | BMT7 | 601 | 171 | 14 | ||
HS5 | HS5 | 754 | 137 | 19 | ||
BMT7 | — | 745 | 139 | 11 | ||
HS5 | — | 820 | 168 | 7 | ||
Exp 6 | BMT8 | BMT8 | 353 | 90 | 28 | |
BMT8 | HS6 | 664 | 87 | 21 | ||
HS6 | BMT8 | 681 | 90 | 88 | ||
HS6 | HS6 | 736 | 164 | 75 | ||
BMT8 | — | 784 | 130 | 18 | ||
HS6 | — | 683 | 153 | 19 | ||
Exp 7 | BMT9 | BMT9 | 345 | 58 | 33 | |
BMT9 | HS4 | 331 | 70 | 23 | ||
HS4 | BMT9 | 288 | 142 | 20 | ||
HS4 | HS4 | >1320 | 194 | 82 | ||
BMT9 | — | 684 | 98 | 7 | ||
HS4 | — | 697 | 176 | 33 |
Experiment . | Source of B cells . | Source of T cells . | Number of transcripts . | Mutated transcripts3-150 (%) . | Nucleotide substitutes3-151 (%) . | |
---|---|---|---|---|---|---|
VH3 . | V3-23 . | |||||
Exp 1 | BMT1 | BMT1 | nd3 | 161 | 12 | |
BMT1 | HS1 | nd | 100 | 8 | ||
HS1 | BMT1 | nd | 138 | 13 | ||
HS1 | HS1 | nd | 155 | 57 | ||
Exp 2 | BMT2 | HS1 | 344 | 151 | 8 | |
Exp 3 | BMT3 | BMT3 | nd | 53 | 15 | |
BMT3 | HS3 | 374 | 99 | 1 | ||
BMT4 | HS3 | >354 | 54 | 86 | ||
HS3 | BMT3 | 712 | 37 | 86 | ||
HS3 | HS3 | >375 | 11 | 65 | ||
BMT3 | — | 726 | 206 | 1 | ||
BMT4 | — | 482 | 59 | 1 | ||
HS3 | — | 381 | 20 | 10 | ||
Exp 4 | BMT6 | BMT6 | 461 | 74 | 1 | |
BMT5 | BMT5 | 922 | 254 | 13 | 0.2 | |
BMT6 | HS4 | 412 | 109 | 10 | ||
BMT5 | HS4 | >742 | 98 | 1 | ||
HS4 | BMT5 | 620 | 273 | 64 | 3.1 | |
HS4 | HS4 | 491 | 74 | 60 | ||
BMT6 | — | 570 | 155 | 11 | ||
BMT5 | — | 789 | 163 | 12 | ||
HS4 | — | 86 | 12 | 0 | ||
Exp 5 | BMT7 | BMT7 | 647 | 152 | 7 | |
BMT7 | HS5 | 751 | 212 | 6 | ||
HS5 | BMT7 | 601 | 171 | 14 | ||
HS5 | HS5 | 754 | 137 | 19 | ||
BMT7 | — | 745 | 139 | 11 | ||
HS5 | — | 820 | 168 | 7 | ||
Exp 6 | BMT8 | BMT8 | 353 | 90 | 28 | |
BMT8 | HS6 | 664 | 87 | 21 | ||
HS6 | BMT8 | 681 | 90 | 88 | ||
HS6 | HS6 | 736 | 164 | 75 | ||
BMT8 | — | 784 | 130 | 18 | ||
HS6 | — | 683 | 153 | 19 | ||
Exp 7 | BMT9 | BMT9 | 345 | 58 | 33 | |
BMT9 | HS4 | 331 | 70 | 23 | ||
HS4 | BMT9 | 288 | 142 | 20 | ||
HS4 | HS4 | >1320 | 194 | 82 | ||
BMT9 | — | 684 | 98 | 7 | ||
HS4 | — | 697 | 176 | 33 |
Nd indicates not determined; BMT, bone marrow transplant; HS, healthy subject. Dash indicates that no T cells were added but that B-cell cultures were supported by L cells supplemented with CD40L (1 μg/mL).
Percentage of V3-23 transcripts with mutation detectable by hybridization.
Incidence (%) of nucleotide substitution per base pair (bp) based on 290 bp/transcript of sequence shown in Figure 4.