Table 1

Regions of CEBP family members analyzed by MALDI-TOF MS

NameChromosome: regions analyzedAnalyzed regions relative to transcriptional start siteLengthNo. of analyzed CpGsLeft primerRight primer
CEBPA_1 chr19: 38485156-38485692 +4 to −531 536 75 TTTTATGGGGGAGTTAGAGTTTTTT CCCCAACAACTCAAAACCAAAAC 
CEBPA_2 chr19: 38485997-38486426 −836 to −1265 429 45 GGGTTGGAAAATTTTTTTTATAATTATTTT CACTCAAAAAACCCCAAAACCTAAC 
CEBPA_3 chr19: 38484095-38484522 +639 to +1066 427 51 TTGTTTATGGTTTTGATTAAGGAGTTTTTT ACCAAACCACCATACACCTACAAC 
CEBPB_1 chr20: 48240467-48241013 −317 to +229 546 66 TTAGGATAGTTTTTAGTTTAGAGGGG CATACTAAATCCCAAACCACCAAAC 
CEBPB_2 chr20: 48239913-48240493 −291 to −871 580 45 ATTGTAGTTGGGAGAAGTGAAGTGATTTAT CCCCTCTAAACTAAAAACTATCCTAAAAAA 
CEBPB_3 chr20: 48241915-48242141 +1131 to +1357 226 27 GGTTGTAGAAGAAGGTGGAGTAGTTGT CTACCAAATACCCCAATACCAAAA 
CEBPD_1 chr8: 48813003-48813574 −321 to +250 571 73 GTGGTATAGTTTTAGGGTGGGTA CAAAAAAAATATCATTCCCAACAAC 
CEBPD_2 chr8: 48813596-48814045 +272 to +721 449 52 TTTTTTTGTTTGTGGGTTTGGAATT CTCCCCCATCTACTCTACTTTTAAC 
CEBPD_3 chr8: 48812469-48813026 −298 to −855 557 72 GTTGGGTAGTTGTTTGAAGAATTGT TACCCACCCTAAAACTATACCAC 
CEBPD_4 chr8: 48814020-48814282 +696 to +958 262 26 GTTAAAAGTAGAGTAGATGGGGGAGA CAACTACTTTAAATTCAAAACACTTTTT 
CEBPG_1 chr19: 38555928-38556250 −322 to −645 322 26 TTAATGTTAATTTTATGTGTGAAATATTTG CATTTTCTAAAATAATTTTATAAACCACC 
CEBPZ_1 chr2: 37311753-37312199 +46 to +492 447 33 AAGGTTAGGATTAAGAAAAGTTATTTTT AAACCTTTAAAATTCCATACCAAAC 
CEBPZ_2 chr2: 37312183-37312383 +62 to −138 201 13 TGGAATTTTAAAGGTTTTTTGATTG ACCCCAAACCTAACCTCAACAATAC 
CEBPZ_3 chr2: 37312183-37312602 +62 to −357 420 32 TGGAATTTTAAAGGTTTTTTGATTG CAAAAACAACACCCACTTACCCAC 
CEBPZ_4 chr2: 37312359-37312781 −114 to −536 423 32 GTATTGTTGAGGTTAGGTTTGGGGT ATATTTCCCTCTCCAAATAAAAAATA 
CEBPE_1 chr14: 22658012-22658410 −304 to +94 399 11 GGAGAGGTCAATGGAGGCCTCATGCTCACA CTCCCTGAGTCACCCCAAGGGGAG 
NameChromosome: regions analyzedAnalyzed regions relative to transcriptional start siteLengthNo. of analyzed CpGsLeft primerRight primer
CEBPA_1 chr19: 38485156-38485692 +4 to −531 536 75 TTTTATGGGGGAGTTAGAGTTTTTT CCCCAACAACTCAAAACCAAAAC 
CEBPA_2 chr19: 38485997-38486426 −836 to −1265 429 45 GGGTTGGAAAATTTTTTTTATAATTATTTT CACTCAAAAAACCCCAAAACCTAAC 
CEBPA_3 chr19: 38484095-38484522 +639 to +1066 427 51 TTGTTTATGGTTTTGATTAAGGAGTTTTTT ACCAAACCACCATACACCTACAAC 
CEBPB_1 chr20: 48240467-48241013 −317 to +229 546 66 TTAGGATAGTTTTTAGTTTAGAGGGG CATACTAAATCCCAAACCACCAAAC 
CEBPB_2 chr20: 48239913-48240493 −291 to −871 580 45 ATTGTAGTTGGGAGAAGTGAAGTGATTTAT CCCCTCTAAACTAAAAACTATCCTAAAAAA 
CEBPB_3 chr20: 48241915-48242141 +1131 to +1357 226 27 GGTTGTAGAAGAAGGTGGAGTAGTTGT CTACCAAATACCCCAATACCAAAA 
CEBPD_1 chr8: 48813003-48813574 −321 to +250 571 73 GTGGTATAGTTTTAGGGTGGGTA CAAAAAAAATATCATTCCCAACAAC 
CEBPD_2 chr8: 48813596-48814045 +272 to +721 449 52 TTTTTTTGTTTGTGGGTTTGGAATT CTCCCCCATCTACTCTACTTTTAAC 
CEBPD_3 chr8: 48812469-48813026 −298 to −855 557 72 GTTGGGTAGTTGTTTGAAGAATTGT TACCCACCCTAAAACTATACCAC 
CEBPD_4 chr8: 48814020-48814282 +696 to +958 262 26 GTTAAAAGTAGAGTAGATGGGGGAGA CAACTACTTTAAATTCAAAACACTTTTT 
CEBPG_1 chr19: 38555928-38556250 −322 to −645 322 26 TTAATGTTAATTTTATGTGTGAAATATTTG CATTTTCTAAAATAATTTTATAAACCACC 
CEBPZ_1 chr2: 37311753-37312199 +46 to +492 447 33 AAGGTTAGGATTAAGAAAAGTTATTTTT AAACCTTTAAAATTCCATACCAAAC 
CEBPZ_2 chr2: 37312183-37312383 +62 to −138 201 13 TGGAATTTTAAAGGTTTTTTGATTG ACCCCAAACCTAACCTCAACAATAC 
CEBPZ_3 chr2: 37312183-37312602 +62 to −357 420 32 TGGAATTTTAAAGGTTTTTTGATTG CAAAAACAACACCCACTTACCCAC 
CEBPZ_4 chr2: 37312359-37312781 −114 to −536 423 32 GTATTGTTGAGGTTAGGTTTGGGGT ATATTTCCCTCTCCAAATAAAAAATA 
CEBPE_1 chr14: 22658012-22658410 −304 to +94 399 11 GGAGAGGTCAATGGAGGCCTCATGCTCACA CTCCCTGAGTCACCCCAAGGGGAG 
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