Regions of CEBP family members analyzed by MALDI-TOF MS
Name . | Chromosome: regions analyzed . | Analyzed regions relative to transcriptional start site . | Length . | No. of analyzed CpGs . | Left primer . | Right primer . |
---|---|---|---|---|---|---|
CEBPA_1 | chr19: 38485156-38485692 | +4 to −531 | 536 | 75 | TTTTATGGGGGAGTTAGAGTTTTTT | CCCCAACAACTCAAAACCAAAAC |
CEBPA_2 | chr19: 38485997-38486426 | −836 to −1265 | 429 | 45 | GGGTTGGAAAATTTTTTTTATAATTATTTT | CACTCAAAAAACCCCAAAACCTAAC |
CEBPA_3 | chr19: 38484095-38484522 | +639 to +1066 | 427 | 51 | TTGTTTATGGTTTTGATTAAGGAGTTTTTT | ACCAAACCACCATACACCTACAAC |
CEBPB_1 | chr20: 48240467-48241013 | −317 to +229 | 546 | 66 | TTAGGATAGTTTTTAGTTTAGAGGGG | CATACTAAATCCCAAACCACCAAAC |
CEBPB_2 | chr20: 48239913-48240493 | −291 to −871 | 580 | 45 | ATTGTAGTTGGGAGAAGTGAAGTGATTTAT | CCCCTCTAAACTAAAAACTATCCTAAAAAA |
CEBPB_3 | chr20: 48241915-48242141 | +1131 to +1357 | 226 | 27 | GGTTGTAGAAGAAGGTGGAGTAGTTGT | CTACCAAATACCCCAATACCAAAA |
CEBPD_1 | chr8: 48813003-48813574 | −321 to +250 | 571 | 73 | GTGGTATAGTTTTAGGGTGGGTA | CAAAAAAAATATCATTCCCAACAAC |
CEBPD_2 | chr8: 48813596-48814045 | +272 to +721 | 449 | 52 | TTTTTTTGTTTGTGGGTTTGGAATT | CTCCCCCATCTACTCTACTTTTAAC |
CEBPD_3 | chr8: 48812469-48813026 | −298 to −855 | 557 | 72 | GTTGGGTAGTTGTTTGAAGAATTGT | TACCCACCCTAAAACTATACCAC |
CEBPD_4 | chr8: 48814020-48814282 | +696 to +958 | 262 | 26 | GTTAAAAGTAGAGTAGATGGGGGAGA | CAACTACTTTAAATTCAAAACACTTTTT |
CEBPG_1 | chr19: 38555928-38556250 | −322 to −645 | 322 | 26 | TTAATGTTAATTTTATGTGTGAAATATTTG | CATTTTCTAAAATAATTTTATAAACCACC |
CEBPZ_1 | chr2: 37311753-37312199 | +46 to +492 | 447 | 33 | AAGGTTAGGATTAAGAAAAGTTATTTTT | AAACCTTTAAAATTCCATACCAAAC |
CEBPZ_2 | chr2: 37312183-37312383 | +62 to −138 | 201 | 13 | TGGAATTTTAAAGGTTTTTTGATTG | ACCCCAAACCTAACCTCAACAATAC |
CEBPZ_3 | chr2: 37312183-37312602 | +62 to −357 | 420 | 32 | TGGAATTTTAAAGGTTTTTTGATTG | CAAAAACAACACCCACTTACCCAC |
CEBPZ_4 | chr2: 37312359-37312781 | −114 to −536 | 423 | 32 | GTATTGTTGAGGTTAGGTTTGGGGT | ATATTTCCCTCTCCAAATAAAAAATA |
CEBPE_1 | chr14: 22658012-22658410 | −304 to +94 | 399 | 11 | GGAGAGGTCAATGGAGGCCTCATGCTCACA | CTCCCTGAGTCACCCCAAGGGGAG |
Name . | Chromosome: regions analyzed . | Analyzed regions relative to transcriptional start site . | Length . | No. of analyzed CpGs . | Left primer . | Right primer . |
---|---|---|---|---|---|---|
CEBPA_1 | chr19: 38485156-38485692 | +4 to −531 | 536 | 75 | TTTTATGGGGGAGTTAGAGTTTTTT | CCCCAACAACTCAAAACCAAAAC |
CEBPA_2 | chr19: 38485997-38486426 | −836 to −1265 | 429 | 45 | GGGTTGGAAAATTTTTTTTATAATTATTTT | CACTCAAAAAACCCCAAAACCTAAC |
CEBPA_3 | chr19: 38484095-38484522 | +639 to +1066 | 427 | 51 | TTGTTTATGGTTTTGATTAAGGAGTTTTTT | ACCAAACCACCATACACCTACAAC |
CEBPB_1 | chr20: 48240467-48241013 | −317 to +229 | 546 | 66 | TTAGGATAGTTTTTAGTTTAGAGGGG | CATACTAAATCCCAAACCACCAAAC |
CEBPB_2 | chr20: 48239913-48240493 | −291 to −871 | 580 | 45 | ATTGTAGTTGGGAGAAGTGAAGTGATTTAT | CCCCTCTAAACTAAAAACTATCCTAAAAAA |
CEBPB_3 | chr20: 48241915-48242141 | +1131 to +1357 | 226 | 27 | GGTTGTAGAAGAAGGTGGAGTAGTTGT | CTACCAAATACCCCAATACCAAAA |
CEBPD_1 | chr8: 48813003-48813574 | −321 to +250 | 571 | 73 | GTGGTATAGTTTTAGGGTGGGTA | CAAAAAAAATATCATTCCCAACAAC |
CEBPD_2 | chr8: 48813596-48814045 | +272 to +721 | 449 | 52 | TTTTTTTGTTTGTGGGTTTGGAATT | CTCCCCCATCTACTCTACTTTTAAC |
CEBPD_3 | chr8: 48812469-48813026 | −298 to −855 | 557 | 72 | GTTGGGTAGTTGTTTGAAGAATTGT | TACCCACCCTAAAACTATACCAC |
CEBPD_4 | chr8: 48814020-48814282 | +696 to +958 | 262 | 26 | GTTAAAAGTAGAGTAGATGGGGGAGA | CAACTACTTTAAATTCAAAACACTTTTT |
CEBPG_1 | chr19: 38555928-38556250 | −322 to −645 | 322 | 26 | TTAATGTTAATTTTATGTGTGAAATATTTG | CATTTTCTAAAATAATTTTATAAACCACC |
CEBPZ_1 | chr2: 37311753-37312199 | +46 to +492 | 447 | 33 | AAGGTTAGGATTAAGAAAAGTTATTTTT | AAACCTTTAAAATTCCATACCAAAC |
CEBPZ_2 | chr2: 37312183-37312383 | +62 to −138 | 201 | 13 | TGGAATTTTAAAGGTTTTTTGATTG | ACCCCAAACCTAACCTCAACAATAC |
CEBPZ_3 | chr2: 37312183-37312602 | +62 to −357 | 420 | 32 | TGGAATTTTAAAGGTTTTTTGATTG | CAAAAACAACACCCACTTACCCAC |
CEBPZ_4 | chr2: 37312359-37312781 | −114 to −536 | 423 | 32 | GTATTGTTGAGGTTAGGTTTGGGGT | ATATTTCCCTCTCCAAATAAAAAATA |
CEBPE_1 | chr14: 22658012-22658410 | −304 to +94 | 399 | 11 | GGAGAGGTCAATGGAGGCCTCATGCTCACA | CTCCCTGAGTCACCCCAAGGGGAG |