Table 2

Probes and genes with spiked expression

Probe IDChromosome locationGene nameDescriptionCases*
206121_at 1p13 AMPD1 Adenosine monophosphate deaminase 1 (isoform M) 
205780_at 22q13.31 BIK BCL2-interacting killer (apoptosis-inducing) 
208451_s_at 6p21.3 C4A /// C4B Complement component 4A (Rodgers blood group) /// complement component 4B (Childo blood group) 
214428_x_at 6p21.3 C4A /// C4B Complement component 4A (Rodgers blood group) /// complement component 4B (Childo blood group) 
226424_at 19p13 CAPS Calcyphosine 
204606_at 9p13 CCL21 Chemokine (C-C motif) ligand 21 
218876_at 16q22.1 CGI-38 Brain-specific protein 
208168_s_at 1q31–32 CHIT1 Chitinase 1 (chitotriosidase) 
205229_s_at 14q12-q13 COCH Coagulation factor C homolog, cochlin 
1554242_a_at 14q12-q13 COCH Coagulation factor C homolog, cochlin 
229721_x_at 22q11.3 DERL3 Der1-like domain family, member 3 
219517_at 15q15.3 ELL3 Elongation factor RNA polymerase II-like 3 
219118_at 12q13 FKBP11 FK506 binding protein 11, 19 kDa 
222067_x_at 6p21.3 HIST1H2BD Histone 1, H2bd 
201656_at 2q31.1 ITGA6 Integrin, α 6 
216430_x_at 15q14-q15 SCGB2A2 Secretoglobin, family 2A, member 2 
205414_s_at 17p12 KIAA0672 KIAA0672 gene product 
210018_x_at 18q21 MALT1 Mucosa-associated lymphoid tissue lymphoma translocation gene 1 
210017_at 18q21 MALT1 Mucosa-associated lymphoid tissue lymphoma translocation gene 1 
221286_s_at 5q23-q31 PACAP Proapoptotic caspase adaptor protein 
201923_at Xp22.11 PRDX4 Peroxiredoxin 4 
223062_s_at 9q21.2 PSAT1 Phosphoserine aminotransferase 1 
206574_s_at 8q24.3 PTP4A3 Protein tyrosine phosphatase type IVA, member 3 
209695_at 8q24.3 PTP4A3 Protein tyrosine phosphatase type IVA, member 3 
1565358_at 17q21 RARA Retinoic acid receptor, α 11 
210258_at 1q31.2 RGS13 Regulator of G-protein signaling 13 11 
1568752_s_at 1q31.2 RGS13 Regulator of G-protein signaling 13 11 
244887_at 1q31.2 RGS13 Regulator of G-protein signaling 13 10 
205725_at 11q12.3-q13.1 SCGB1A1 Secretoglobin, family 1A, member 1 (uteroglobin) 
227952_at 4p16.3 ZNF595 Zinc finger protein 595 
Probe IDChromosome locationGene nameDescriptionCases*
206121_at 1p13 AMPD1 Adenosine monophosphate deaminase 1 (isoform M) 
205780_at 22q13.31 BIK BCL2-interacting killer (apoptosis-inducing) 
208451_s_at 6p21.3 C4A /// C4B Complement component 4A (Rodgers blood group) /// complement component 4B (Childo blood group) 
214428_x_at 6p21.3 C4A /// C4B Complement component 4A (Rodgers blood group) /// complement component 4B (Childo blood group) 
226424_at 19p13 CAPS Calcyphosine 
204606_at 9p13 CCL21 Chemokine (C-C motif) ligand 21 
218876_at 16q22.1 CGI-38 Brain-specific protein 
208168_s_at 1q31–32 CHIT1 Chitinase 1 (chitotriosidase) 
205229_s_at 14q12-q13 COCH Coagulation factor C homolog, cochlin 
1554242_a_at 14q12-q13 COCH Coagulation factor C homolog, cochlin 
229721_x_at 22q11.3 DERL3 Der1-like domain family, member 3 
219517_at 15q15.3 ELL3 Elongation factor RNA polymerase II-like 3 
219118_at 12q13 FKBP11 FK506 binding protein 11, 19 kDa 
222067_x_at 6p21.3 HIST1H2BD Histone 1, H2bd 
201656_at 2q31.1 ITGA6 Integrin, α 6 
216430_x_at 15q14-q15 SCGB2A2 Secretoglobin, family 2A, member 2 
205414_s_at 17p12 KIAA0672 KIAA0672 gene product 
210018_x_at 18q21 MALT1 Mucosa-associated lymphoid tissue lymphoma translocation gene 1 
210017_at 18q21 MALT1 Mucosa-associated lymphoid tissue lymphoma translocation gene 1 
221286_s_at 5q23-q31 PACAP Proapoptotic caspase adaptor protein 
201923_at Xp22.11 PRDX4 Peroxiredoxin 4 
223062_s_at 9q21.2 PSAT1 Phosphoserine aminotransferase 1 
206574_s_at 8q24.3 PTP4A3 Protein tyrosine phosphatase type IVA, member 3 
209695_at 8q24.3 PTP4A3 Protein tyrosine phosphatase type IVA, member 3 
1565358_at 17q21 RARA Retinoic acid receptor, α 11 
210258_at 1q31.2 RGS13 Regulator of G-protein signaling 13 11 
1568752_s_at 1q31.2 RGS13 Regulator of G-protein signaling 13 11 
244887_at 1q31.2 RGS13 Regulator of G-protein signaling 13 10 
205725_at 11q12.3-q13.1 SCGB1A1 Secretoglobin, family 1A, member 1 (uteroglobin) 
227952_at 4p16.3 ZNF595 Zinc finger protein 595 
*

Number of cases showing spiked expression of a given gene.