Sequence of the VDJ junctional TCRβ regions of the clonally expanded TCRαβ+/CD4+ T-LGL showing Vβ13S1-J1.1
Case no. . | V-J usage . | 3′ end of Vβ13.1 . | N . | Dβ1 . | N . | 5′ end of Jβ . |
---|---|---|---|---|---|---|
1 | Vβ13S1-J1.1 | AGCAGT | AA | gggACAGGGggc | AGT | aaCACTGAAGCTTTC |
2 | Vβ13S1-J1.1 | AGCAGT | AA | gggACAGGGGGC | — | aaCACTGAAGCTTTC |
3 | Vβ13S1-J1.1 | AGCAG | AAA | gggACAGGGGGC | — | aaCACTGAAGCTTTC |
4 | Vβ13S1-J1.1 | AGCAGT | TAC | gggaCAGGGGGc | CG | aacACTGAAGCTTTC |
5 | Vβ13S1-J1.1 | AGCAGT | TCC | gggaCAGGGGgc | AC | aaCACTGAAGCTTTC |
6 | Vβ13S1-J1.1 | AGCAG | ACAT | gggaCAGGGggc | TAG | aaCACTGAAGCTTTC |
10 | Vβ13S1-J1.1 | AGC | CGGC | ggGACAGGGGgc | AAA | aacACTGAAGCTTTC |
12 | Vβ13S1-J1.1 | AGCAGT | TAT | gggaCAGGGGGC | — | aCACTGAAGCTTTC |
13 | Vβ13S1-J1.1 | AGCAG | GC | ggGACAGGGGGC | — | aacACTGAAGCTTTC |
14 | Vβ13S1-J1.1 | AGCA | ATCT | gggACAGGGggc | TAG | aaCACTGAAGCTTTC |
15 | Vβ13S1-J1.1 | AGCAGT | — | TACCAAGGCTCGG | — | aacaCTGAAGCTTTC |
10* | Vβ13S1-J1.1 | AGCAGTTAC | — | — | — | AACACTGAAGCTTC |
52* | Vβ13S1-J1.1 | AGCAGTT | GG | gggaCAGGGGGc | TGG | aACACTGAAGCTTTC |
29*† | Vβ13S1-J1.1 | AGCA | — | gggACAGGGGGc | TTGT | aACACTGAAGCTTTC |
Case no. . | V-J usage . | 3′ end of Vβ13.1 . | N . | Dβ1 . | N . | 5′ end of Jβ . |
---|---|---|---|---|---|---|
1 | Vβ13S1-J1.1 | AGCAGT | AA | gggACAGGGggc | AGT | aaCACTGAAGCTTTC |
2 | Vβ13S1-J1.1 | AGCAGT | AA | gggACAGGGGGC | — | aaCACTGAAGCTTTC |
3 | Vβ13S1-J1.1 | AGCAG | AAA | gggACAGGGGGC | — | aaCACTGAAGCTTTC |
4 | Vβ13S1-J1.1 | AGCAGT | TAC | gggaCAGGGGGc | CG | aacACTGAAGCTTTC |
5 | Vβ13S1-J1.1 | AGCAGT | TCC | gggaCAGGGGgc | AC | aaCACTGAAGCTTTC |
6 | Vβ13S1-J1.1 | AGCAG | ACAT | gggaCAGGGggc | TAG | aaCACTGAAGCTTTC |
10 | Vβ13S1-J1.1 | AGC | CGGC | ggGACAGGGGgc | AAA | aacACTGAAGCTTTC |
12 | Vβ13S1-J1.1 | AGCAGT | TAT | gggaCAGGGGGC | — | aCACTGAAGCTTTC |
13 | Vβ13S1-J1.1 | AGCAG | GC | ggGACAGGGGGC | — | aacACTGAAGCTTTC |
14 | Vβ13S1-J1.1 | AGCA | ATCT | gggACAGGGggc | TAG | aaCACTGAAGCTTTC |
15 | Vβ13S1-J1.1 | AGCAGT | — | TACCAAGGCTCGG | — | aacaCTGAAGCTTTC |
10* | Vβ13S1-J1.1 | AGCAGTTAC | — | — | — | AACACTGAAGCTTC |
52* | Vβ13S1-J1.1 | AGCAGTT | GG | gggaCAGGGGGc | TGG | aACACTGAAGCTTTC |
29*† | Vβ13S1-J1.1 | AGCA | — | gggACAGGGGGc | TTGT | aACACTGAAGCTTTC |