Combined cross analysis
| QTL . | Chr . | Crosses combined . | CCA Peak, cM (Mb) . | 95% CI, cM (Mb) . | Other QTL detected cM (Mb) . | HAM peak (Mb)* . |
|---|---|---|---|---|---|---|
| Chcmq1 | 2 | B6x129S1, C3xD, KSxSM, MRxSM | 58.2 (115.5) | 52.4-62.2 (96.7-127.9) | 28.4 (48.7) | None |
| Chcmq2 | 9 | AxB, CByx129S1, KSxSM, 129S1xA | 56.4 (104.0) | 52.4-60.4 (99.9-110.6) | None | 102.16-103.38 |
| Chcmq3 | 7 | AxB, BxCB, BxD, MRxSM, NZxSM | 54.9 (110.0) | 53.5-56.8 (104.5-114.5) | None | 108.50-111.58 |
| Chcmq5 | 6 | Bx129S1, KSxSM | 43.8 (94.9) | 39.5-53.8 (88.5-116.5) | 1.8 (4.8) | None |
| QTL . | Chr . | Crosses combined . | CCA Peak, cM (Mb) . | 95% CI, cM (Mb) . | Other QTL detected cM (Mb) . | HAM peak (Mb)* . |
|---|---|---|---|---|---|---|
| Chcmq1 | 2 | B6x129S1, C3xD, KSxSM, MRxSM | 58.2 (115.5) | 52.4-62.2 (96.7-127.9) | 28.4 (48.7) | None |
| Chcmq2 | 9 | AxB, CByx129S1, KSxSM, 129S1xA | 56.4 (104.0) | 52.4-60.4 (99.9-110.6) | None | 102.16-103.38 |
| Chcmq3 | 7 | AxB, BxCB, BxD, MRxSM, NZxSM | 54.9 (110.0) | 53.5-56.8 (104.5-114.5) | None | 108.50-111.58 |
| Chcmq5 | 6 | Bx129S1, KSxSM | 43.8 (94.9) | 39.5-53.8 (88.5-116.5) | 1.8 (4.8) | None |
Only peaks within the interval common to CCA and interval-specific haplotyping are listed. The peak Mb intervals given include more than one suggestive peak, but addition of 500 kb on either side results in a single overlapping interval.