Association between each of the seven SNPs and risk of MGUS
Chr . | SNP . | Genotype . | MGUS risk . | Myeloma risk . | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
UK . | German . | Combined . | . | . | |||||||||||||
Case . | Control . | OR . | 95% CI . | Case . | Control . | OR . | 95% CI . | OR . | 95% CI . | P . | Phet . | I2 . | OR . | 95% CI . | |||
2p23.3 | rs6746082 | ||||||||||||||||
CC | 15 | 238 | 1.0 (ref) | 9 | 108 | 1.0 (ref) | |||||||||||
AC | 74 | 1758 | 0.67 | 0.38-1.18 | 83 | 725 | 1.37 | 0.67-2.81 | |||||||||
AA | 152 | 3202 | 0.75 | 0.44-1.30 | 148 | 1274 | 1.39 | 0.69-2.81 | |||||||||
Per allele | 0.99 | 0.80-1.24 | 1.08 | 0.86-1.36 | 1.04 | 0.92-1.16 | .63 | .67 | 0 | 1.30 | 1.20-1.41 | ||||||
RAF | 0.78 | 0.79 | 0.79 | 0.78 | |||||||||||||
3p22.1 | rs1052501 | ||||||||||||||||
AA | 161 | 3668 | 1.0 (ref) | 152 | 1482 | 1.0 (ref) | |||||||||||
GA | 80 | 1391 | 1.31 | 1.00-1.73 | 83 | 576 | 1.40 | 1.06-1.87 | |||||||||
GG | 11 | 137 | 1.83 | 0.97-3.45 | 5 | 49 | 0.99 | 0.39-2.53 | |||||||||
Per allele | 1.33 | 1.06-1.66 | 1.26 | 0.99-1.61 | 1.30 | 1.15-1.46 | .002 | .73 | 0 | 1.32 | 1.22-1.43 | ||||||
RAF | 0.20 | 0.16 | 0.19 | 0.16 | |||||||||||||
3q26.2 | rs10936599 | ||||||||||||||||
AA | 5 | 325 | 1.0 (ref) | 13 | 142 | 1.0 (ref) | |||||||||||
AG | 111 | 1914 | 3.76 | 1.53-9.31 | 88 | 778 | 1.24 | 0.67-2.27 | |||||||||
GG | 133 | 2960 | 2.92 | 1.19-7.18 | 139 | 1187 | 1.28 | 0.71-2.32 | |||||||||
Per allele | 1.02 | 0.83-1.26 | 1.08 | 0.87-1.35 | 1.05 | 0.94-1.17 | .54 | .71 | 0 | 1.35 | 1.25-1.47 | ||||||
RAF | 0.76 | 0.75 | 0.76 | 0.75 | |||||||||||||
6p21.33 | rs2285803 | ||||||||||||||||
GG | 117 | 2699 | 1.0 (ref) | 99 | 1047 | 1.0 (ref) | |||||||||||
AG | 102 | 2055 | 1.15 | 0.88-1.50 | 113 | 833 | 1.43 | 1.08-1.91 | |||||||||
AA | 24 | 444 | 1.25 | 0.79-1.96 | 28 | 226 | 1.31 | 0.84-2.04 | |||||||||
Per allele | 1.13 | 0.93-1.37 | 1.24 | 1.01-1.51 | 1.18 | 1.07-1.31 | .019 | .50 | 0 | 1.30 | 1.19-1.43 | ||||||
RAF | 0.31 | 0.28 | 0.35 | 0.31 | |||||||||||||
7p15.3 | rs4487645 | ||||||||||||||||
AA | 26 | 646 | 1.0 (ref) | 24 | 226 | 1.0 (ref) | |||||||||||
AC | 93 | 2333 | 0.99 | 0.64-1.54 | 104 | 887 | 1.10 | 0.69-1.76 | |||||||||
CC | 132 | 2216 | 1.48 | 0.96-2.27 | 117 | 992 | 1.11 | 0.70-1.76 | |||||||||
Per allele | 1.32 | 1.08-1.60 | 1.11 | 0.90-1.36 | 1.21 | 1.10-1.34 | .007 | .24 | 28 | 1.24 | 1.16-1.32 | ||||||
RAF | 0.71 | 0.65 | 0.70 | 0.68 | |||||||||||||
17p11.2 | rs4273077 | ||||||||||||||||
AA | 197 | 4221 | 1.0 (ref) | 163 | 1690 | 1.0 (ref) | |||||||||||
AG | 47 | 926 | 1.09 | 0.78-1.51 | 64 | 390 | 1.70 | 1.25-2.32 | |||||||||
GG | 8 | 48 | 3.57 | 1.67-7.65 | 11 | 27 | 4.22 | 2.06-8.67 | |||||||||
Per allele | 1.31 | 1.00-1.72 | 1.87 | 1.45-2.41 | 1.58 | 1.38-1.80 | 1.64 × 10−6 | .03 | 80 | 1.28 | 1.18-1.39 | ||||||
RAF | 0.13 | 0.10 | 0.18 | 0.11 | |||||||||||||
22q13.1 | rs877529 | ||||||||||||||||
GG | 73 | 1633 | 1.0 (ref) | 72 | 692 | 1.0 (ref) | |||||||||||
AG | 134 | 2560 | 1.17 | 0.88-1.57 | 117 | 1026 | 1.09 | 0.80-1.49 | |||||||||
AA | 43 | 1000 | 0.96 | 0.65-1.41 | 51 | 389 | 1.26 | 0.86-1.84 | |||||||||
Per allele | 1.00 | 0.84-1.20 | 1.12 | 0.93-1.36 | 1.06 | 0.97-1.16 | .40 | .41 | 0 | 1.22 | 1.14-1.31 | ||||||
RAF | 0.44 | 0.44 | 0.46 | 0.43 |
Chr . | SNP . | Genotype . | MGUS risk . | Myeloma risk . | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
UK . | German . | Combined . | . | . | |||||||||||||
Case . | Control . | OR . | 95% CI . | Case . | Control . | OR . | 95% CI . | OR . | 95% CI . | P . | Phet . | I2 . | OR . | 95% CI . | |||
2p23.3 | rs6746082 | ||||||||||||||||
CC | 15 | 238 | 1.0 (ref) | 9 | 108 | 1.0 (ref) | |||||||||||
AC | 74 | 1758 | 0.67 | 0.38-1.18 | 83 | 725 | 1.37 | 0.67-2.81 | |||||||||
AA | 152 | 3202 | 0.75 | 0.44-1.30 | 148 | 1274 | 1.39 | 0.69-2.81 | |||||||||
Per allele | 0.99 | 0.80-1.24 | 1.08 | 0.86-1.36 | 1.04 | 0.92-1.16 | .63 | .67 | 0 | 1.30 | 1.20-1.41 | ||||||
RAF | 0.78 | 0.79 | 0.79 | 0.78 | |||||||||||||
3p22.1 | rs1052501 | ||||||||||||||||
AA | 161 | 3668 | 1.0 (ref) | 152 | 1482 | 1.0 (ref) | |||||||||||
GA | 80 | 1391 | 1.31 | 1.00-1.73 | 83 | 576 | 1.40 | 1.06-1.87 | |||||||||
GG | 11 | 137 | 1.83 | 0.97-3.45 | 5 | 49 | 0.99 | 0.39-2.53 | |||||||||
Per allele | 1.33 | 1.06-1.66 | 1.26 | 0.99-1.61 | 1.30 | 1.15-1.46 | .002 | .73 | 0 | 1.32 | 1.22-1.43 | ||||||
RAF | 0.20 | 0.16 | 0.19 | 0.16 | |||||||||||||
3q26.2 | rs10936599 | ||||||||||||||||
AA | 5 | 325 | 1.0 (ref) | 13 | 142 | 1.0 (ref) | |||||||||||
AG | 111 | 1914 | 3.76 | 1.53-9.31 | 88 | 778 | 1.24 | 0.67-2.27 | |||||||||
GG | 133 | 2960 | 2.92 | 1.19-7.18 | 139 | 1187 | 1.28 | 0.71-2.32 | |||||||||
Per allele | 1.02 | 0.83-1.26 | 1.08 | 0.87-1.35 | 1.05 | 0.94-1.17 | .54 | .71 | 0 | 1.35 | 1.25-1.47 | ||||||
RAF | 0.76 | 0.75 | 0.76 | 0.75 | |||||||||||||
6p21.33 | rs2285803 | ||||||||||||||||
GG | 117 | 2699 | 1.0 (ref) | 99 | 1047 | 1.0 (ref) | |||||||||||
AG | 102 | 2055 | 1.15 | 0.88-1.50 | 113 | 833 | 1.43 | 1.08-1.91 | |||||||||
AA | 24 | 444 | 1.25 | 0.79-1.96 | 28 | 226 | 1.31 | 0.84-2.04 | |||||||||
Per allele | 1.13 | 0.93-1.37 | 1.24 | 1.01-1.51 | 1.18 | 1.07-1.31 | .019 | .50 | 0 | 1.30 | 1.19-1.43 | ||||||
RAF | 0.31 | 0.28 | 0.35 | 0.31 | |||||||||||||
7p15.3 | rs4487645 | ||||||||||||||||
AA | 26 | 646 | 1.0 (ref) | 24 | 226 | 1.0 (ref) | |||||||||||
AC | 93 | 2333 | 0.99 | 0.64-1.54 | 104 | 887 | 1.10 | 0.69-1.76 | |||||||||
CC | 132 | 2216 | 1.48 | 0.96-2.27 | 117 | 992 | 1.11 | 0.70-1.76 | |||||||||
Per allele | 1.32 | 1.08-1.60 | 1.11 | 0.90-1.36 | 1.21 | 1.10-1.34 | .007 | .24 | 28 | 1.24 | 1.16-1.32 | ||||||
RAF | 0.71 | 0.65 | 0.70 | 0.68 | |||||||||||||
17p11.2 | rs4273077 | ||||||||||||||||
AA | 197 | 4221 | 1.0 (ref) | 163 | 1690 | 1.0 (ref) | |||||||||||
AG | 47 | 926 | 1.09 | 0.78-1.51 | 64 | 390 | 1.70 | 1.25-2.32 | |||||||||
GG | 8 | 48 | 3.57 | 1.67-7.65 | 11 | 27 | 4.22 | 2.06-8.67 | |||||||||
Per allele | 1.31 | 1.00-1.72 | 1.87 | 1.45-2.41 | 1.58 | 1.38-1.80 | 1.64 × 10−6 | .03 | 80 | 1.28 | 1.18-1.39 | ||||||
RAF | 0.13 | 0.10 | 0.18 | 0.11 | |||||||||||||
22q13.1 | rs877529 | ||||||||||||||||
GG | 73 | 1633 | 1.0 (ref) | 72 | 692 | 1.0 (ref) | |||||||||||
AG | 134 | 2560 | 1.17 | 0.88-1.57 | 117 | 1026 | 1.09 | 0.80-1.49 | |||||||||
AA | 43 | 1000 | 0.96 | 0.65-1.41 | 51 | 389 | 1.26 | 0.86-1.84 | |||||||||
Per allele | 1.00 | 0.84-1.20 | 1.12 | 0.93-1.36 | 1.06 | 0.97-1.16 | .40 | .41 | 0 | 1.22 | 1.14-1.31 | ||||||
RAF | 0.44 | 0.44 | 0.46 | 0.43 |
Relationship between each SNP and risk of multiple myeloma (MM) is shown by using data on 4692 MM cases from the previously published GWAS.
Chr, chromosome; I2, variation attributable to heterogeneity; Phet, heterogeneity P value; RAF, risk allele frequency; ref, reference; UK, United Kingdom.