Table 1

Most frequent recurrently affected regions detected in 64 ALCL samples

Lesion/CytobandStart*Size, kb*RefSeq genesALCL %ALKALCL %ALK+ALCL %P
Losses        
 17p13.3-p12 526 11 747.22 >20 (TP53) 25 42 .002 
 6q21 105 944 900 951.75 ATG5, PRDM1 19 56 <.001 
 13q32.3-q33.3 99 090 837 9349.42 >20 16 23 ns 
 16q23.2 78 371 498 11 642 MAF, WWOX 16 29 .004 
Gains        
 1q 121 344 093 127 880.29 >20 23 32 15 ns 
 8q24.22 133 799 280 919.4 NDRG1, PHF20L1, SLA, ST3GAL1, TG, WISP1 17 23 12 ns 
Lesion/CytobandStart*Size, kb*RefSeq genesALCL %ALKALCL %ALK+ALCL %P
Losses        
 17p13.3-p12 526 11 747.22 >20 (TP53) 25 42 .002 
 6q21 105 944 900 951.75 ATG5, PRDM1 19 56 <.001 
 13q32.3-q33.3 99 090 837 9349.42 >20 16 23 ns 
 16q23.2 78 371 498 11 642 MAF, WWOX 16 29 .004 
Gains        
 1q 121 344 093 127 880.29 >20 23 32 15 ns 
 8q24.22 133 799 280 919.4 NDRG1, PHF20L1, SLA, ST3GAL1, TG, WISP1 17 23 12 ns 

P values were calculated between ALK+ALCL and ALKALCL frequencies.

ns, not significant.

*

Numbering according to Genome Reference Consortium Human Build 37 (GRCh37) (hg19).

According to the NCBI RefSeq database.

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