Sequences of primers, probes, shRNA, and siRNA oligonucleotides used
PCR | |
PRELI-Fwd1 | 5′-CGGAATTCCATGGTGAAGTATTTCCTGGGCCA-3′ |
PRELI-Rev1 | 5′-TGCTCTAGACTACACAAACTGTTGCTGCTGCTG-3′ |
PRELI-Rev2 | 5′-CGCGGATCCCTACACAAACTGTTGCTGCTGCTG-3′ |
Taqman RT-PCR | |
EF1α-Probe | 5′-(FAM)-AGCGCCGGCTATGCCCCTG-(TAMRA)-3′ |
EF1α-Fwd | 5′-CTGAACCATCCAGGCCAAAT-3′ |
EF1α-Rev | 5′-GCCGTGTGGCAATCCAAT-3′ |
PRELI-Probe | 5′-(FAM)-CCGGGAAGCCTGGGTCTCCTCTAGCT-(TAMRA)-3′ |
PRELI-Fwd | 5′-TGGCTGGACTGAAATCC-3′ |
PRELI-Rev | 5′-CAGCTCTGGAGACACCAAAT-3′ |
STAT6-Probe | 5′-(FAM)-CAGGACACCATCAAACCACTGCCAAA-(TAMRA)-3′ |
STAT6-Fwd | 5′-TGGGCCGTGGCTTCAC-3′ |
STAT6-Rev | 5′-CCGGAGACAGCGTTTGGT-3′ |
siRNA/shRNA sequence | |
Scramble | 5′-GCGCGCUUUGUAGGAUUCGUU-3′ |
PRELI-siRNA1 | 5′-CCAAGACUAUGAAGGGUUUU-3′ |
PRELI-siRNA2 | 5′-CCAAGGACCUCGCCAGCAAUU-3′ |
PRELI-shRNA | 5′-GGAGAAGGCAAAGGAGACGUU-3′ |
PCR | |
PRELI-Fwd1 | 5′-CGGAATTCCATGGTGAAGTATTTCCTGGGCCA-3′ |
PRELI-Rev1 | 5′-TGCTCTAGACTACACAAACTGTTGCTGCTGCTG-3′ |
PRELI-Rev2 | 5′-CGCGGATCCCTACACAAACTGTTGCTGCTGCTG-3′ |
Taqman RT-PCR | |
EF1α-Probe | 5′-(FAM)-AGCGCCGGCTATGCCCCTG-(TAMRA)-3′ |
EF1α-Fwd | 5′-CTGAACCATCCAGGCCAAAT-3′ |
EF1α-Rev | 5′-GCCGTGTGGCAATCCAAT-3′ |
PRELI-Probe | 5′-(FAM)-CCGGGAAGCCTGGGTCTCCTCTAGCT-(TAMRA)-3′ |
PRELI-Fwd | 5′-TGGCTGGACTGAAATCC-3′ |
PRELI-Rev | 5′-CAGCTCTGGAGACACCAAAT-3′ |
STAT6-Probe | 5′-(FAM)-CAGGACACCATCAAACCACTGCCAAA-(TAMRA)-3′ |
STAT6-Fwd | 5′-TGGGCCGTGGCTTCAC-3′ |
STAT6-Rev | 5′-CCGGAGACAGCGTTTGGT-3′ |
siRNA/shRNA sequence | |
Scramble | 5′-GCGCGCUUUGUAGGAUUCGUU-3′ |
PRELI-siRNA1 | 5′-CCAAGACUAUGAAGGGUUUU-3′ |
PRELI-siRNA2 | 5′-CCAAGGACCUCGCCAGCAAUU-3′ |
PRELI-shRNA | 5′-GGAGAAGGCAAAGGAGACGUU-3′ |
Fwd indicates forward; Rev, reverse; FAM, 6-carboxyfluorescein; and TAMRA, 6-carboxytetramethylrhodamine.