Table 1

Binding affinities of synthetic peptides

HLAPositionLength, merSequenceScoreFluorescence index
A*0201 Aur-A271-279 KIADFGWSV 3911 0.93 
A*0201 Aur-A63-71 KLVSSHKPV 243 0.23 
A*0201 Aur-A207-215 YLILEYAPL 147 1.47 
A*0201 WT17-15 DLNALLPAV 12 0.06 
A*0201 CMVpp65495-503 NLVPMVATV 160 1.71 
A*2402 Aur-A207-215 YLILEYAPL 0.99 
A*2402 WT17-15 DLNALLPAV 0.18 0.02 
A*2402 WT1235-243CYTWNQMNL 200 4.5 
HLAPositionLength, merSequenceScoreFluorescence index
A*0201 Aur-A271-279 KIADFGWSV 3911 0.93 
A*0201 Aur-A63-71 KLVSSHKPV 243 0.23 
A*0201 Aur-A207-215 YLILEYAPL 147 1.47 
A*0201 WT17-15 DLNALLPAV 12 0.06 
A*0201 CMVpp65495-503 NLVPMVATV 160 1.71 
A*2402 Aur-A207-215 YLILEYAPL 0.99 
A*2402 WT17-15 DLNALLPAV 0.18 0.02 
A*2402 WT1235-243CYTWNQMNL 200 4.5 

The binding affinities of synthetic peptides for HLA molecules were predicted by computer algorithms available on the National Institutes of Health BIMAS website (http://www-bimas.cit.nih.gov/molbio/hla_bind). The binding affinities of synthetic peptides for HLA molecules were evaluated by MHC stabilization assay as detailed in “HLA peptide–binding assay.”

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