Table 3.

Prevalence of alternative first exons in various functional gene classes


Gene category

Total no. genes

No. genes with alternative first exons

Genes with alternative first exons, %
Globins   9   0   0.0  
Heme biosynthesis   8   3   37.5  
Transcription factors   11   6   54.5  
Cytoskeletal proteins   13   7   53.8  
Plasma membrane proteins   33   10   30.3  
Glycolytic enzymes etc
 
29
 
10
 
34.5
 

Gene category

Total no. genes

No. genes with alternative first exons

Genes with alternative first exons, %
Globins   9   0   0.0  
Heme biosynthesis   8   3   37.5  
Transcription factors   11   6   54.5  
Cytoskeletal proteins   13   7   53.8  
Plasma membrane proteins   33   10   30.3  
Glycolytic enzymes etc
 
29
 
10
 
34.5
 

We compared the prevalence of genes with alternative first exons among the various gene groups analyzed in this study. Certain categories appear more likely to exhibit alternative first exons. For example, none of the globin genes possess alternative 5′ ends, whereas more than half of the erythroid transcription factors and cytoskeletal proteins display such feature. The data suggest that 5′ complexity may represent an important genetic mechanism for certain cellular processes.

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