Table 1.

Primers used for SSCP and direct sequencing analysis

Forward primers*Reverse primers*Hybridization temperature, °CSize of PCR product, bpRestriction enzyme used (sizes of products after digestion, bp)
(EX1S) 5′-GTTGGGCTGGTGGAGGAGT-3′ (EX1AS) 5′-GACACCCCAAGGGGACTATC-3′ 64 310 N/A  
(EX2S) 5′-CTCTCTCCAGACCCCAGGA-3′  (EX2AS) 5′-CCTGACACCTCCTCTCTCA-3′ 64 190 N/A  
(EX3S) 5′-ACAGGCCTGGCAGTCTC-3′ (EX3AS) 5′-CTGAGCTCACCCCATACTG-3′ 64 270 N/A  
(EX4S) 5′-TGGCTGCTGGGTCAGTT-3′ (EX4AS) 5′-CTTCCTCCAGTCTCCTGTGC-3′ 60 400 RsaI (180 and 220)  
(EX5S) 5′-GGCGAGGGCTTAATGCTAT-3′ (EX5AS) 5′-GGGGCGGCTCCCATGTGG-3′ 60 440 AluI (140 and 300) 
Forward primers*Reverse primers*Hybridization temperature, °CSize of PCR product, bpRestriction enzyme used (sizes of products after digestion, bp)
(EX1S) 5′-GTTGGGCTGGTGGAGGAGT-3′ (EX1AS) 5′-GACACCCCAAGGGGACTATC-3′ 64 310 N/A  
(EX2S) 5′-CTCTCTCCAGACCCCAGGA-3′  (EX2AS) 5′-CCTGACACCTCCTCTCTCA-3′ 64 190 N/A  
(EX3S) 5′-ACAGGCCTGGCAGTCTC-3′ (EX3AS) 5′-CTGAGCTCACCCCATACTG-3′ 64 270 N/A  
(EX4S) 5′-TGGCTGCTGGGTCAGTT-3′ (EX4AS) 5′-CTTCCTCCAGTCTCCTGTGC-3′ 60 400 RsaI (180 and 220)  
(EX5S) 5′-GGCGAGGGCTTAATGCTAT-3′ (EX5AS) 5′-GGGGCGGCTCCCATGTGG-3′ 60 440 AluI (140 and 300) 
*

EX indicates exon, followed by exon number; S, sense; and AS, antisense.

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