List of the top 20 genes identified in a matched-pair analysis differentially expressed between initial diagnosis and relapse (32 precursor B-ALL)
Rank . | Time of high expression . | FDR, % . | P . | Affymetrix ID . | Symbol . | Gene title . | Reported function . |
---|---|---|---|---|---|---|---|
1 | Diagnosis | 0.66 | .000001 | 204642_at | EDG1 | Endothelial differentiation, sphingolipid G-protein-coupled receptor, 1 | Cell adhesion, signal transduction |
2 | Diagnosis | 0.66 | .000002 | 203795_s_at | BCL7A | B-cell CLL/lymphoma 7A | Putative tumor suppressor |
3 | Relapse | 0.97 | .000003 | 203554_x_at | PTTG1 | Pituitary tumor-transforming 1 | DNA replication and repair; cell cycle |
4 | Relapse | 2.11 | .00001 | 200834_s_at | RPS21 | Ribosomal protein S21 | Protein biosynthesis |
5 | Relapse | 2.11 | .000016 | 200763_s_at | RPLP1 | Ribosomal protein, large, P1 | Protein biosynthesis |
6 | Relapse | 2.11 | .000017 | 213166_x_at | FLJ14346 | Hypothetical protein FLJ14346 | Unknown |
7 | Relapse | 2.11 | .000019 | 201757_at | NDUFS5 | NADH-coenzyme Q reductase | Mitochondrial electron transport |
8 | Relapse | 2.11 | .000021 | 200980_s_at | PDHA1 | Pyruvate dehydrogenase (lipoamide) alpha 1 | Glycolysis; protein polyubiquitination |
9 | Diagnosis | 2.11 | .000023 | 203796_s_at | BCL7A | B-cell CLL/lymphoma 7A | Putative tumor suppressor |
10 | Relapse | 2.11 | .000026 | 203989_x_at | F2R | Coagulation factor II (thrombin) receptor | Cell-cycle regulation, apoptosis |
11 | Relapse | 2.11 | .000029 | 200061_s_at | RPS24 | Ribosomal protein S24 | Protein biosynthesis |
12 | Relapse | 2.11 | .000029 | 201001_s_at | UBE2V1 | Ubiquitin-conjugating enzyme E2 variant 1 | Cell-cycle progression; DNA repair |
13 | Relapse | 2.11 | .000031 | 212834_at | DDX52 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 | Nucleic acid binding, helicase activity |
14 | Diagnosis | 2.12 | .000034 | 213875_x_at | C6orf62 | Chromosome 6 open reading frame 62 | Unknown |
15 | Diagnosis | 2.51 | .000044 | 208892_s_at | DUSP6 | Dual-specificity phosphatase 6 | Cell-cycle progression; DNA repair |
16 | Diagnosis | 2.51 | .000048 | 206864_s_at | HRK | Harakiri, BCL2 interacting protein (contains only BH3 domain) | Induction of apoptosis |
17 | Relapse | 2.51 | .000049 | 217491_x_at | COX7C | Cytochrome c oxidase subunit VIIc | Generation of precursor metabolites and energy |
18 | Relapse | 2.51 | .000052 | 201002_s_at | UBE2V1 | Ubiquitin-conjugating enzyme E2 variant | Cell-cycle progression; DNA repair |
19 | Relapse | 2.51 | .000054 | 202279_at | C14orf2 | Chromosome 14 open reading frame 2 | Unknown |
20 | Diagnosis | 2.51 | .000057 | 49485_at | PRDM4 | PR domain containing 4 | Transcription regulation |
Rank . | Time of high expression . | FDR, % . | P . | Affymetrix ID . | Symbol . | Gene title . | Reported function . |
---|---|---|---|---|---|---|---|
1 | Diagnosis | 0.66 | .000001 | 204642_at | EDG1 | Endothelial differentiation, sphingolipid G-protein-coupled receptor, 1 | Cell adhesion, signal transduction |
2 | Diagnosis | 0.66 | .000002 | 203795_s_at | BCL7A | B-cell CLL/lymphoma 7A | Putative tumor suppressor |
3 | Relapse | 0.97 | .000003 | 203554_x_at | PTTG1 | Pituitary tumor-transforming 1 | DNA replication and repair; cell cycle |
4 | Relapse | 2.11 | .00001 | 200834_s_at | RPS21 | Ribosomal protein S21 | Protein biosynthesis |
5 | Relapse | 2.11 | .000016 | 200763_s_at | RPLP1 | Ribosomal protein, large, P1 | Protein biosynthesis |
6 | Relapse | 2.11 | .000017 | 213166_x_at | FLJ14346 | Hypothetical protein FLJ14346 | Unknown |
7 | Relapse | 2.11 | .000019 | 201757_at | NDUFS5 | NADH-coenzyme Q reductase | Mitochondrial electron transport |
8 | Relapse | 2.11 | .000021 | 200980_s_at | PDHA1 | Pyruvate dehydrogenase (lipoamide) alpha 1 | Glycolysis; protein polyubiquitination |
9 | Diagnosis | 2.11 | .000023 | 203796_s_at | BCL7A | B-cell CLL/lymphoma 7A | Putative tumor suppressor |
10 | Relapse | 2.11 | .000026 | 203989_x_at | F2R | Coagulation factor II (thrombin) receptor | Cell-cycle regulation, apoptosis |
11 | Relapse | 2.11 | .000029 | 200061_s_at | RPS24 | Ribosomal protein S24 | Protein biosynthesis |
12 | Relapse | 2.11 | .000029 | 201001_s_at | UBE2V1 | Ubiquitin-conjugating enzyme E2 variant 1 | Cell-cycle progression; DNA repair |
13 | Relapse | 2.11 | .000031 | 212834_at | DDX52 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 | Nucleic acid binding, helicase activity |
14 | Diagnosis | 2.12 | .000034 | 213875_x_at | C6orf62 | Chromosome 6 open reading frame 62 | Unknown |
15 | Diagnosis | 2.51 | .000044 | 208892_s_at | DUSP6 | Dual-specificity phosphatase 6 | Cell-cycle progression; DNA repair |
16 | Diagnosis | 2.51 | .000048 | 206864_s_at | HRK | Harakiri, BCL2 interacting protein (contains only BH3 domain) | Induction of apoptosis |
17 | Relapse | 2.51 | .000049 | 217491_x_at | COX7C | Cytochrome c oxidase subunit VIIc | Generation of precursor metabolites and energy |
18 | Relapse | 2.51 | .000052 | 201002_s_at | UBE2V1 | Ubiquitin-conjugating enzyme E2 variant | Cell-cycle progression; DNA repair |
19 | Relapse | 2.51 | .000054 | 202279_at | C14orf2 | Chromosome 14 open reading frame 2 | Unknown |
20 | Diagnosis | 2.51 | .000057 | 49485_at | PRDM4 | PR domain containing 4 | Transcription regulation |