Table 2.

Combined pathogenic allele frequency for HC genes in the 1000 Genomes Project (1000G), Exome Sequencing Project (ESP), and Exome Aggregation Consortium (ExAc) datasets

Gene1000GESP6500ExAcGeographical distribution
HFE (p.Cys282Tyr) 0.013 0.048 0.0324 Highest prevalence in Northern Europe 
HFE (non-p.Cys282Tyr) 0.001 0.0002 0.000307  
HJV  0.00074 0.000316 Highest prevalence in Southern Asia 
TFR2 0.0004 0.0003 0.000102 Most frequent among non-Finnish European populations 
HAMP 0.0002  0.0000165 Several populations 
SLC40A1 0.0008 0.0009 0.00034 Several populations (highest prevalence among Africans) 
Gene1000GESP6500ExAcGeographical distribution
HFE (p.Cys282Tyr) 0.013 0.048 0.0324 Highest prevalence in Northern Europe 
HFE (non-p.Cys282Tyr) 0.001 0.0002 0.000307  
HJV  0.00074 0.000316 Highest prevalence in Southern Asia 
TFR2 0.0004 0.0003 0.000102 Most frequent among non-Finnish European populations 
HAMP 0.0002  0.0000165 Several populations 
SLC40A1 0.0008 0.0009 0.00034 Several populations (highest prevalence among Africans) 

Modified from Wallace and Subramaniam.19

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