Table 3. Fusion transcripts in MF 51... | American Society of Hematology

Table 3.

Fusion transcripts in MF⁵¹

Sample	Fusion transcript	Breakpoints (DNA)	Breakpoint type	Event class	WGS confirmed
MF1	KDM6A–IL1RAPL1	chrX:44746566–chrX:29451290	Genic–genic	ITX	Yes
MF1	CHIC1–RP2	chrX:72844450–chrX:46680435	Genic–nongenic	ITX	Yes
MF3	ANKRD13A–CUL9	chr12:110448655–chr6:43160142	Genic–genic	CTX	Yes
MF3	CLEC16A–SCARB1	chr16:11067010–chr12:125350896	Genic–nongenic	CTX	Yes
MF3	SSH2–GRAP2	chr17:28059210–chr22:40314573	Genic–genic	CTX	Yes
MF3	LMF1–TAF15	chr16:986148–chr17:34145925	Genic–genic	CTX	Yes
MF3	ATXN1–TP63	chr6:16307814–chr3:189470345	Genic–genic	CTX	Yes
MF4	CCR7–DOT1L	chr17:38718403–chr19:2181252	Genic–genic	CTX	Yes
MF5	PHACTR4–EPB41	chr1:28755797–chr1:29246304	Genic–genic	iDel	Yes
MF5	ADAM12–MMRN2	chr10:127935628–chr10:88698606	Genic–genic	iDel	Yes
MF5	TRAPPC10–TRPM2	chr21:45487448–chr21:45795335	Genic–genic	iDel	Yes
MF5	ARHGAP26–TENM2	chr5:142272242–chr5:167448836	Genic–genic	ITX	Yes
MF6	ANK3–RNLS	chr10:62168031–chr10:90101461	Genic–genic	ITX	Yes
MF6	ELF1–SATB2	chr13:41540637–chr2:200369768	Genic–nongenic	CTX	Yes
MF7	TP53–GPR3	chr17:7579754–chr1:27718138	Genic–nongenic	CTX	Yes
MF7	CLPP–NR3C1	chr19:6365544–chr5:142800539	Genic–genic	CTX	Yes
MF7	SARNP–WRAP53	chr12:56161974–chr17:7593927	Genic–genic	CTX	Yes
MF8	SETD5–RNF19A	chr3:9497374–chr8:101391443	Genic–nongenic	CTX	Yes
MF8	SUDS3–TMEM132B	chr12:118847216–chr12:125987360	Genic–genic	ITX	Yes
MF8	AACS–STAB2	chr12:125625503–chr12:104094623	Genic–genic	ITX	Yes
MF8	RPUSD3–RNF19A	chr3:9882804–chr8:101303862	Genic–genic	CTX	Yes
MF8	YTHDF3–LIFR	chr8:64081882–chr5:38586949	Genic–genic	CTX	Yes
MF9	DPM1–UBE2V1	chr20:49574368–chr20:48703893	Genic–genic	iDel	Yes
MF9	KCNAB2–ESPN	chr1:6071941–chr1:6493075	Genic–genic	iDel	Yes

Sample	Fusion transcript	Breakpoints (DNA)	Breakpoint type	Event class	WGS confirmed
MF1	KDM6A–IL1RAPL1	chrX:44746566–chrX:29451290	Genic–genic	ITX	Yes
MF1	CHIC1–RP2	chrX:72844450–chrX:46680435	Genic–nongenic	ITX	Yes
MF3	ANKRD13A–CUL9	chr12:110448655–chr6:43160142	Genic–genic	CTX	Yes
MF3	CLEC16A–SCARB1	chr16:11067010–chr12:125350896	Genic–nongenic	CTX	Yes
MF3	SSH2–GRAP2	chr17:28059210–chr22:40314573	Genic–genic	CTX	Yes
MF3	LMF1–TAF15	chr16:986148–chr17:34145925	Genic–genic	CTX	Yes
MF3	ATXN1–TP63	chr6:16307814–chr3:189470345	Genic–genic	CTX	Yes
MF4	CCR7–DOT1L	chr17:38718403–chr19:2181252	Genic–genic	CTX	Yes
MF5	PHACTR4–EPB41	chr1:28755797–chr1:29246304	Genic–genic	iDel	Yes
MF5	ADAM12–MMRN2	chr10:127935628–chr10:88698606	Genic–genic	iDel	Yes
MF5	TRAPPC10–TRPM2	chr21:45487448–chr21:45795335	Genic–genic	iDel	Yes
MF5	ARHGAP26–TENM2	chr5:142272242–chr5:167448836	Genic–genic	ITX	Yes
MF6	ANK3–RNLS	chr10:62168031–chr10:90101461	Genic–genic	ITX	Yes
MF6	ELF1–SATB2	chr13:41540637–chr2:200369768	Genic–nongenic	CTX	Yes
MF7	TP53–GPR3	chr17:7579754–chr1:27718138	Genic–nongenic	CTX	Yes
MF7	CLPP–NR3C1	chr19:6365544–chr5:142800539	Genic–genic	CTX	Yes
MF7	SARNP–WRAP53	chr12:56161974–chr17:7593927	Genic–genic	CTX	Yes
MF8	SETD5–RNF19A	chr3:9497374–chr8:101391443	Genic–nongenic	CTX	Yes
MF8	SUDS3–TMEM132B	chr12:118847216–chr12:125987360	Genic–genic	ITX	Yes
MF8	AACS–STAB2	chr12:125625503–chr12:104094623	Genic–genic	ITX	Yes
MF8	RPUSD3–RNF19A	chr3:9882804–chr8:101303862	Genic–genic	CTX	Yes
MF8	YTHDF3–LIFR	chr8:64081882–chr5:38586949	Genic–genic	CTX	Yes
MF9	DPM1–UBE2V1	chr20:49574368–chr20:48703893	Genic–genic	iDel	Yes
MF9	KCNAB2–ESPN	chr1:6071941–chr1:6493075	Genic–genic	iDel	Yes

Known cancer genes (NCG 5.0) are in bold.

CTX, interchromosomal rearrangement; iDel, interstitial deletion; ITX, intrachromosomal rearrangement.

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